Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Chaperonin Cpn60/TCP-1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  702 bits (1812), Expect = 0.0
 Identities = 365/544 (67%), Positives = 450/544 (82%), Gaps = 4/544 (0%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAKDV+F +DAR ++L GV+ LA+AVKVTLGPKGRNVV+DKSFGAP ITKDGVSVA+EI
Sbjct: 1   MAAKDVKFSSDARDRLLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           EL+DKF+NMGAQM++EVAS++ D AGDGTTTATVLAQAIV EG KAVAAGMNPMDLKRGI
Sbjct: 61  ELKDKFENMGAQMLREVASKSADVAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGI 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           D AV A V+++K  S   A    IAQVGTISAN D  VG IIA AM+KVG +GVITVEE 
Sbjct: 121 DLAVAAVVKDVKTRSRKIATNDEIAQVGTISANGDEEVGKIIARAMDKVGHEGVITVEEA 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
           + L  ELDVVEGMQFDRGYLSPYF+ N E    +L+NP+IL+ +KK+S ++ LLPVLE V
Sbjct: 181 KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILIHEKKLSGLQPLLPVLEAV 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
            ++ RPLLI+AEDVEGEALATLVVN +RG +KVA+VKAPGFGDRRKAML+DIAILTGG V
Sbjct: 241 VQSGRPLLIIAEDVEGEALATLVVNRLRGGLKVASVKAPGFGDRRKAMLEDIAILTGGQV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           ISE++G++LE  TL+ LG AK V+ITK+N+TI+DGAG +A I  R AQIR  IE+ TSDY
Sbjct: 301 ISEDLGIKLETVTLDMLGTAKTVTITKDNTTIVDGAGVKADIDARCAQIRATIEDTTSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           D+EKLQER+AKL+GGVAVI+VG A+EVE+KEKKDRV+DA+HATRAAVEEG++AGGGVAL+
Sbjct: 361 DREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALL 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANN-VRAGEGNYGYN 479
            AA  L +L   N +Q VGI +  RA++AP+RQI +NAG + +VVA   + + + ++GYN
Sbjct: 421 HAAKALDALSPANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYN 480

Query: 480 AATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDMGMGG 539
           A TGVY +++++G++DPTKV R+ALQ AASVA L+ITTEAM+ E+P+K  PA+P    GG
Sbjct: 481 AQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPEK-KPALP--AGGG 537

Query: 540 MGGM 543
           MG M
Sbjct: 538 MGDM 541