Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., 60 kDa chaperonin from Phaeobacter inhibens DSM 17395

 Score =  713 bits (1841), Expect = 0.0
 Identities = 370/550 (67%), Positives = 450/550 (81%), Gaps = 6/550 (1%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAKDV+F  DAR +ML GVNILADAVKVTLGPKGRNVVLDKSFGAP ITKDGVSVA+EI
Sbjct: 1   MAAKDVKFDTDARNRMLNGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           ELEDKF+NMGAQMVKEVAS+ ND AGDGTTTATVLAQAIV EGLK VAAG+NPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGLKQVAAGLNPMDLKRGI 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           D A    VE +KA++    D+  +AQVGTISAN +S +G  IA+AM+KVG +GVITVEE 
Sbjct: 121 DLATAKVVEGIKAMAREVKDSAEVAQVGTISANGESEIGQQIADAMQKVGNEGVITVEEN 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
           + L+ E  VVEGMQFDRGYLSPYF+ N +    +L++  ILL +KK+S+++ ++P+LE V
Sbjct: 181 KGLETETTVVEGMQFDRGYLSPYFVTNADKMVADLEDCMILLHEKKLSSLQAMVPLLEQV 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
            ++ +PLLI+AEDVEGEALATLVVN +RG +K+AAVKAPGFGDRRKAMLQDIAILTGG V
Sbjct: 241 IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           ISE++G++LE  T++ LG AK++ ITK+ +TI+DGAG++A I+ RVAQIR QIEE TSDY
Sbjct: 301 ISEDLGMKLESVTMDMLGTAKKIEITKDETTIVDGAGEKAEIEARVAQIRAQIEETTSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           D+EKLQERVAKLAGGVAVI+VG  TEVE+KE+KDRV+DAL+ATRAAV+EGV+ GGGVAL+
Sbjct: 361 DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVIVGGGVALV 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVR-AGEGNYGYN 479
           +A   L  L G N +QN GI +  +A+EAPLRQI +NAG + +VVA  VR + + N+G+N
Sbjct: 421 QAGKALEGLEGANADQNAGIVIVRKAIEAPLRQIAENAGVDGAVVAGKVRESSDNNFGFN 480

Query: 480 AATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAP----AMPDM 535
           A T  YGDM   G++DP KV R+AL+ AASVAGL+ITTEAM+ + P KD       MPDM
Sbjct: 481 AQTEEYGDMFAFGVIDPAKVARTALEDAASVAGLLITTEAMVADKPSKDGAGAGGGMPDM 540

Query: 536 -GMGGMGGMM 544
            GMGGMGGMM
Sbjct: 541 GGMGGMGGMM 550