Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., 60 kDa chaperonin 1 GroEL1 (protein CPN60-1) (GroEL protein 1) from Mycobacterium tuberculosis H37Rv

 Score =  506 bits (1302), Expect = e-147
 Identities = 272/530 (51%), Positives = 372/530 (70%), Gaps = 9/530 (1%)

Query: 3   AKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIEL 62
           +K + +   AR  M  G++ LAD V+VTLGP+GR+VVL K+FG PT+T DGV+VAREIEL
Sbjct: 2   SKLIEYDETARRAMEVGMDKLADTVRVTLGPRGRHVVLAKAFGGPTVTNDGVTVAREIEL 61

Query: 63  EDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDK 122
           ED F+++GAQ+VK VA++ ND AGDGTTTAT+LAQA++  GL+ VAAG+NP+ L  GI K
Sbjct: 62  EDPFEDLGAQLVKSVATKTNDVAGDGTTTATILAQALIKGGLRLVAAGVNPIALGVGIGK 121

Query: 123 AVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQA 182
           A  A  E L A + P +    IAQV T+S+  D  +G+++ EAM KVG DGV++VEE   
Sbjct: 122 AADAVSEALLASATPVSGKTGIAQVATVSSR-DEQIGDLVGEAMSKVGHDGVVSVEESST 180

Query: 183 LQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGVAK 242
           L  EL+  EG+ FD+G+LS YF+ + ++    L++  ILL   KIS++ +LLP+LE VA 
Sbjct: 181 LGTELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAG 240

Query: 243 ASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVVIS 302
             +PLLIVAEDVEGEALATLVVN +R  +K  AVK P FGDRRKA L+D+A++TGG V++
Sbjct: 241 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVN 300

Query: 303 EEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYDK 362
            + G+ L +  LE LG A+RV ++K+++ I+DG G   A+  R   +R +I+++ SD+D+
Sbjct: 301 PDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRAKHLRAEIDKSDSDWDR 360

Query: 363 EKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRA 422
           EKL ER+AKLAGGVAVIKVGAATE  +KE+K+ VEDA+ A +AAVEEG+V GGG +LI  
Sbjct: 361 EKLGERLAKLAGGVAVIKVGAATETALKERKESVEDAVAAAKAAVEEGIVPGGGASLIHQ 420

Query: 423 ASKL-----SSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYG 477
           A K      +SL GD   + +G+ V   A+ APL  I  NAG + SVV N V      +G
Sbjct: 421 ARKALTELRASLTGD---EVLGVDVFSEALAAPLFWIAANAGLDGSVVVNKVSELPAGHG 477

Query: 478 YNAATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKK 527
            N  T  YGD+   G++DP KVTRSA+  A+SVA +++TTE ++ + P K
Sbjct: 478 LNVNTLSYGDLAADGVIDPVKVTRSAVLNASSVARMVLTTETVVVDKPAK 527