Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis JJ

 Score =  134 bits (336), Expect = 1e-35
 Identities = 147/577 (25%), Positives = 249/577 (43%), Gaps = 91/577 (15%)

Query: 9   GNDA-RVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQ 67
           G DA R+ +L G  I+A+ V+ TLGPKG + +L    G   +T DGV++ RE+ +E    
Sbjct: 17  GRDAQRMNILAG-RIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVE---- 71

Query: 68  NMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAA 127
           +  A+M+ EVA       GDGTTTA V+A  ++ +  + +   ++P  + +G   A   A
Sbjct: 72  HPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKA 131

Query: 128 VEELK--ALSVPCADTKAIAQV------GTISANSDSSVGNIIAEAME-------KVGRD 172
            E LK  A  V   D + + ++      G  +  +   +  II EA+        KV +D
Sbjct: 132 QELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKD 191

Query: 173 GVITVEEGQALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKIS---N 229
            +   ++  A  D+ ++++G+  D+  +S           + L N  I + + +      
Sbjct: 192 LIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIR 251

Query: 230 IRELLPVLEGVAKASRPLLIVAEDVEGEALATLVVNN-----------MRGIVKVAAVKA 278
           I +   ++E + +  + L  +  +++      L                 GIV    VK 
Sbjct: 252 ITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVK- 310

Query: 279 PGFGDRRKAMLQDIAILTGGVVISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGD 338
                  K+ ++ +A  TG  VI+      ++  + +DLG+A  V   K        +GD
Sbjct: 311 -------KSDMEKLAKATGANVIT-----NIKDLSADDLGEAGLVEERKI-------SGD 351

Query: 339 QAAIQGRVAQIRQQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVED 398
                         +EE        K  + V  L  G         TE  ++E    V+D
Sbjct: 352 SMIF----------VEEC-------KHPKAVTMLIRG--------TTEHVIEEVARAVDD 386

Query: 399 ALHATRAAVEEG-VVAGGGVALIRAASKLSSLV-GDNEEQNVGIRVALRAMEAPLRQIVK 456
           A+      +E+G +V+GGG   +  + KL     G +  + + +R    A+E   R + +
Sbjct: 387 AVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAE 446

Query: 457 NAGDEESVVANNVRA-----GEGNYGYNAATGVYGDMIEMGILDPTKVTRSALQFAASVA 511
           NAG +   +   VRA     G    G N  TG   DM E G+++P +V   A+Q AA   
Sbjct: 447 NAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAEST 506

Query: 512 GLMITTEAMITELPKKDAPAMPDM----GMGGMGGMM 544
            +++  + +I     + AP M DM    GMGGM GMM
Sbjct: 507 EMLLRIDDVIAAEKLRGAPDMGDMGGMPGMGGMPGMM 543