Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., chaperonin GroEL (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  877 bits (2265), Expect = 0.0
 Identities = 460/545 (84%), Positives = 499/545 (91%), Gaps = 1/545 (0%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAK+V FGNDARVKML GVNILA+AVKVTLGPKGRNVVLDKSFG+P ITKDGVSVA+EI
Sbjct: 1   MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           ELEDKF+NMGAQMVKEVAS+ANDAAGDGTTTATVLAQAIV EGLKAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           DKAVIAAV ELK LS  CAD+KAIAQVGTISANSD S+G IIA AMEKVG++GVITVEEG
Sbjct: 121 DKAVIAAVAELKNLSQDCADSKAIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEG 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
           QAL++ELDVVEGMQFDRGYLSPYFIN  E+GSVELD+PF+LLVDKKISNIRELLP+LEG+
Sbjct: 181 QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
           AK  +PLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQD+AILTGG V
Sbjct: 241 AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           I+EEIGLELEKATLEDLG AKRV ITK+N+TIIDG G+QA I+ RV+QI+QQIEE+TSDY
Sbjct: 301 IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           DKEKLQER+AKLAGGVAVIKVGAATEVEMKEKK RVEDALHATRAAVEEGVV GGGVALI
Sbjct: 361 DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA 480
           R ASK++ +   NE+Q  G+ +ALRAMEAPLRQI  NAG+E SVVANNV+ G GNYGYNA
Sbjct: 421 RVASKIADVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA 480

Query: 481 ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMPDM-GMGG 539
               YGDM+EMGILDPTKVTRSALQFAAS+AGLMITTEAM+ ELPK DAP M  M GMGG
Sbjct: 481 GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVAELPKADAPDMGGMGGMGG 540

Query: 540 MGGMM 544
           MGGMM
Sbjct: 541 MGGMM 545