Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., chaperonin, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  691 bits (1783), Expect = 0.0
 Identities = 362/545 (66%), Positives = 437/545 (80%), Gaps = 4/545 (0%)

Query: 1   MAAKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MA+K++ F   AR K+  GV+ LA+AVKVTLGPKGRNVV++KSFG+P ITKDGVSVA+EI
Sbjct: 1   MASKEILFDTKAREKLSRGVDKLANAVKVTLGPKGRNVVIEKSFGSPVITKDGVSVAKEI 60

Query: 61  ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI 120
           ELEDKF+NMGAQMVKEVAS+ +D AGDGTTTAT+LAQAI  EG+K VAAG NPM +KRG+
Sbjct: 61  ELEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAIYREGVKLVAAGRNPMAIKRGV 120

Query: 121 DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG 180
           DKAV + V EL  L+ P  D K IAQVGTISANSDS++GNIIAEAM KVG++GVITVEE 
Sbjct: 121 DKAVESLVRELGNLAKPTRDQKEIAQVGTISANSDSTIGNIIAEAMSKVGKEGVITVEEA 180

Query: 181 QALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGV 240
           + L+  L+VVEGMQFDRGYLSPYF+ + E    ELD PFIL  +KKIS ++++LPVLE V
Sbjct: 181 KGLETTLEVVEGMQFDRGYLSPYFVTDPEKMVCELDEPFILCNEKKISTMKDMLPVLEQV 240

Query: 241 AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVV 300
           AK  RPL+I+AEDV+GEALATLVVN +RG ++V A+KAPGFG+RRKAMLQDIA+LTGG V
Sbjct: 241 AKMQRPLVIIAEDVDGEALATLVVNKLRGALQVVAIKAPGFGERRKAMLQDIAVLTGGQV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDY 360
           +SE++G++LE  ++ DLG AKRV I KEN+TI+DGAG    I+ RV QIR QIEE TSDY
Sbjct: 301 VSEDMGIKLENISVADLGTAKRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDY 360

Query: 361 DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI 420
           D+EKLQER+AKL GGVAVI VGAATE EMKEKKDRVEDAL+ATRAAVEEG+V GGG AL+
Sbjct: 361 DREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALV 420

Query: 421 RAASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNA 480
           R A  L  +   ++++  G+ +  RA+E PLRQI  NAG E S+V   VR G+  +G+NA
Sbjct: 421 RVAKVLDDIKPADDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDGFGFNA 480

Query: 481 ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITEL--PKKDAPAMPDMGMG 538
           ATG Y D+I +G++DP KVTR ALQ AASVA L++TTE  I E   PKKD P MP  GMG
Sbjct: 481 ATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMP-MPG-GMG 538

Query: 539 GMGGM 543
           GMGGM
Sbjct: 539 GMGGM 543