Pairwise Alignments

Query, 544 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., 60 kDa chaperonin (groEL) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  634 bits (1634), Expect = 0.0
 Identities = 329/545 (60%), Positives = 417/545 (76%), Gaps = 4/545 (0%)

Query: 3   AKDVRFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIEL 62
           AK++ F  DAR ++ +GV+ LA+AVKVTLGPKGRNV+++K FGAP ITKDGV+VA+EIEL
Sbjct: 2   AKEILFNIDARDQLKKGVDALANAVKVTLGPKGRNVIIEKKFGAPHITKDGVTVAKEIEL 61

Query: 63  EDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDK 122
            D +QN GAQ+VKEVAS+  D AGDGTTTATVLAQAIV EGLK V AG +PMD+KRGIDK
Sbjct: 62  ADAYQNTGAQLVKEVASKTGDDAGDGTTTATVLAQAIVAEGLKNVTAGASPMDIKRGIDK 121

Query: 123 AVIAAVEELKALSVPCADT-KAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQ 181
           AV   VE +KA +    D    I QV T+SAN+D  +G +IA+AM KV +DGVIT+EE +
Sbjct: 122 AVAKVVESIKAQAETVGDNYDKIEQVATVSANNDPVIGKLIADAMRKVSKDGVITIEEAK 181

Query: 182 ALQDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLVDKKISNIRELLPVLEGVA 241
                + VVEGMQFDRGYLS YF+ N E    E++ P+IL+ DKKISN+++ LP+LE   
Sbjct: 182 GTDTTIGVVEGMQFDRGYLSAYFVTNTEKMECEMEKPYILIYDKKISNLKDFLPILEPAV 241

Query: 242 KASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVVI 301
           +  RPLL++AEDV+ EAL TLVVN +R  +K+ AVKAPGFGDRRK ML+DIAILTGGVVI
Sbjct: 242 QTGRPLLVIAEDVDSEALTTLVVNRLRSQLKICAVKAPGFGDRRKEMLEDIAILTGGVVI 301

Query: 302 SEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYD 361
           SEE GL+LE+AT+E LG A +V+++K+ +TI++GAG +  I+ R  QI+ QI    SDYD
Sbjct: 302 SEEKGLKLEQATIEMLGTADKVTVSKDYTTIVNGAGVKENIKERCDQIKAQIVATKSDYD 361

Query: 362 KEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIR 421
           +EKLQER+AKL+GGVAV+ VGAA+EVEMKEKKDRV+DAL ATRAA+EEG++ GGGVA IR
Sbjct: 362 REKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIIPGGGVAYIR 421

Query: 422 AASKLSSLVGDNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGNYGYNAA 481
           A   L  + GDN ++  GI +  RA+E PLR+IV NAG E +VV   VR G+G++GYNA 
Sbjct: 422 AIDSLEGMKGDNADETTGIGIIKRAIEEPLREIVANAGKEGAVVVQKVREGKGDFGYNAR 481

Query: 482 TGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMP--DMGMGG 539
           T VY ++   G++DP KV R AL+ AAS+AG+ +TTE +I E  K+D P MP    GMGG
Sbjct: 482 TDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECVIVE-KKEDKPEMPMGAPGMGG 540

Query: 540 MGGMM 544
           MGGMM
Sbjct: 541 MGGMM 545