Pairwise Alignments

Query, 252 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., succinate dehydrogenase, iron-sulfur protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  151 bits (381), Expect = 1e-41
 Identities = 86/228 (37%), Positives = 134/228 (58%), Gaps = 8/228 (3%)

Query: 11  ILRYDPANDAEPHMQRF--EVPFDETMSVLDAIGYVKDHLDKDLSYRWSCRMAICGSCGI 68
           + RY+P  D +P+MQ +  EV     M VLDA+  +K+  D  L +R SCR  +CGS G+
Sbjct: 7   VYRYNPDVDTKPYMQDYSLEVADGTDMMVLDALIKLKEK-DPTLVFRRSCREGVCGSDGL 65

Query: 69  MVNGVPKLACKSFLRDYP-EGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGNDRK 127
            +NG   LAC + +  +  + ++I PL   P+ +DL+VD+T F ++ E IKP++I +D++
Sbjct: 66  NMNGKNGLACITPVSTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFLINDDKQ 125

Query: 128 PEDGTNLQTPEQMARYKQFAGCINCGLCYAACPQFGLNPE-FLGPAALTLAHRYNLDSRD 186
           P    +LQ+PEQ A       CI C  C  ACP F  NP+ F+GP+ L  A+R+ +DSRD
Sbjct: 126 PAR-EHLQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYRFLIDSRD 184

Query: 187 NGKAERMKLINGDNGAWGCTFVGYCSEVCPKHVDPAAAVNQGKVESSL 234
               ER+  ++     + C  +  C +VCPK ++P  A+  G ++S L
Sbjct: 185 TATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAI--GHIKSML 230