Pairwise Alignments

Query, 252 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., fumarate reductase iron-sulfur protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  120 bits (302), Expect = 2e-32
 Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 6/223 (2%)

Query: 1   MSAQRIQKVDILRYDPAN-DAEPHMQRFEVPFDETMSVLDAIGYVKDHLDKDLSYRWSCR 59
           MS  R    +I RYDP   + +P M R+++     M+V  A+  +++  D  L + + CR
Sbjct: 1   MSQGRQLTFNIFRYDPQEPNDKPKMVRYQLTETPGMTVFIALNKLREEQDTSLQFDFVCR 60

Query: 60  MAICGSCGIMVNGVPKLACKSFLRDYPEG-VKIEPLANFPIEKDLIVDMTPFIERL-EAI 117
             ICGSC +++NG P LAC++    YP+G + + PL  F +  DL V+   F+  L E +
Sbjct: 61  AGICGSCAMVINGFPTLACRTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERL 120

Query: 118 KPYI--IGNDRKPEDGTNLQTPEQMARYKQFAGCINCGLCYAACPQFGLNPEFLGPAALT 175
           K ++    ND           PE+ AR  +   C+ CG+C +AC    +   F+G   + 
Sbjct: 121 KLWLHPKANDISIHRLEEPMAPEEAARLYELERCVECGVCVSACATKQMRETFVGAVGMM 180

Query: 176 LAHRYNLDSRDNGKAERM-KLINGDNGAWGCTFVGYCSEVCPK 217
              R+ LDSRD   AE    +I   +G +GC  +  C + CPK
Sbjct: 181 KIARFELDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPK 223