Pairwise Alignments

Query, 602 a.a., fumarate reductase (quinol) flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 590 a.a., succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup from Pseudomonas stutzeri RCH2

 Score =  428 bits (1100), Expect = e-124
 Identities = 255/608 (41%), Positives = 365/608 (60%), Gaps = 48/608 (7%)

Query: 1   MQILTTDIAVIGAGGAGLRTAIAAAEANPHLEVALISKVYPMRSHTVAAEGGSAAVIKDE 60
           ++ L+ D  ++G GGAG+R A+  A++    + A+++KV+P RSHTV+A+GG    I   
Sbjct: 4   IRTLSFDAIIVGGGGAGMRAALQLAQSGH--KTAVVTKVFPTRSHTVSAQGGITCAIASA 61

Query: 61  DSLDN---HFNDTVGGGDWLCEQDVVEYFVANATREMIQMEQWGCPWSRKENGEVNVRRF 117
           D  D+   H  DTV G D++ +QD +EY  +     + ++E  G P+SR E G +  R F
Sbjct: 62  DPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRPF 121

Query: 118 GGMKVE--------RTWFAADKTGFHMLHTLFQTSMKYPQIKRLDEYFVVDLLVDE-GEI 168
           GG   +        RT  AAD+TG  +LHTL+Q ++K   +  L+E++ VDL+ ++ G +
Sbjct: 122 GGQSKDFGKGGQAARTCAAADRTGHALLHTLYQGNLKNNTVF-LNEWYAVDLVKNQDGAV 180

Query: 169 QGLIAIHMSEGELVTIKAKSVVLATGGAGRVYHCNTNGGIVTGDGMAMAFRHGVPLRDME 228
            G+IAI +  GE V I++K+ VLATGGAGR+Y   TN  I TGDG+ MA R GVP++D+E
Sbjct: 181 VGVIAICIETGETVYIRSKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE 240

Query: 229 FVQYHPTGLPGTGILMTEGCRGEGGIIVNKHGYRYLQDYGMGPETPVGQPKNKYMELGPR 288
             Q+HPTG+ G G+L+TEGCRGEGG ++NKHG R+++ Y          P  K  +L  R
Sbjct: 241 MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYA---------PNAK--DLAGR 289

Query: 289 DKVSQAFWHEQQKGNTIKHPLGDVVHLDLRHLGEEYLQERLPFICELAKAYVNVDPAKEP 348
           D V+++   E   GN    P GD V L L HLGEE L  RLP ICEL+K + +VDP   P
Sbjct: 290 DVVARSMVKEILAGNGC-GPDGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAP 348

Query: 349 IPIRPTVHYTMGGIETN--GEC--------ETRIKGLFAVGECASVGLHGANRLGSNSLA 398
           +P+ PT HY MGGI TN  G+         +T I GLFAVGE A V +HGANRLG NSL 
Sbjct: 349 VPVVPTCHYMMGGIATNIHGQAITQDANGNDTIIDGLFAVGEVACVSVHGANRLGGNSLL 408

Query: 399 EFVVFGRVAG---EKAVERAAEFKGWNEKAIAAQVKAVEDRIAALMQQEGDENWATIRTE 455
           + VVFGR AG   EKA++   E +G    A    +     R+A L ++   E+ A +R E
Sbjct: 409 DLVVFGRAAGLHLEKALKDGIEHRG----ASDTDLDVALSRLAGLNERTTGEDVAPLRKE 464

Query: 456 MGHTMEAGCGIYRQEDLMQETIDKLAELKERYKRISIKDKGKVFNTDLLYAIEVGYGLDV 515
           + + M+   G++R  + MQ+ I +L +L++R   + I DK + FNT  + A+E+   L+V
Sbjct: 465 LQNCMQNYFGVFRTGEYMQKGIAQLVDLRQRIANVKISDKSQAFNTARIEALELQNLLEV 524

Query: 516 AEAMVHSAILRKESRGAHQRLDEGCTERDDVQFLKHSLAFYQEGQTPK--IDYSPVKITK 573
           AEA   +A  RKESRGAH R  E   ERDD  +L H+L F  + +  K  ++++P  +  
Sbjct: 525 AEATAIAAENRKESRGAHAR--EDFEERDDENWLCHTLYFPGDKRVAKRAVNFAPKTVPA 582

Query: 574 SQPKARLY 581
            +PK R Y
Sbjct: 583 FEPKVRTY 590