Pairwise Alignments

Query, 602 a.a., fumarate reductase (quinol) flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., Succinate dehydrogenase flavoprotein subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  395 bits (1015), Expect = e-114
 Identities = 240/602 (39%), Positives = 335/602 (55%), Gaps = 46/602 (7%)

Query: 7   DIAVIGAGGAGLRTAIAAAEANPHLEVALISKVYPMRSHTVAAEGGSAAVIKD--EDSLD 64
           D  V+GAGGAGLR      E    L+ A I+KV+P RSHTVAA+GG  A + +  ED+  
Sbjct: 12  DALVVGAGGAGLRATFGLVEQG--LKTACITKVFPTRSHTVAAQGGIGAALGNMAEDNWK 69

Query: 65  NHFNDTVGGGDWLCEQDVVEYFVANATREMIQMEQWGCPWSRKENGEVNVRRFGG----- 119
            H  DTV G DWL +QD +EY    A   + ++E +G P+SR E+G +  R FGG     
Sbjct: 70  WHMYDTVKGADWLGDQDAIEYMCREAIPAVYELEHYGVPFSRTEDGRIYQRPFGGHMRNF 129

Query: 120 --MKVERTWFAADKTGFHMLHTLFQTSMKYPQIKRLDEYFVVDLLVDEGEIQGLIAIHMS 177
               V+R   AAD+TG  +L TL+Q S+++   +   EYF +DL++++G  +G+IA  M 
Sbjct: 130 GEAPVQRACAAADRTGHAILQTLYQQSLRF-NAEFFVEYFALDLIIEDGVCRGVIAWCME 188

Query: 178 EGELVTIKAKSVVLATGGAGRVYHCNTNGGIVTGDGMAMAFRHGVPLRDMEFVQYHPTGL 237
           +G +   K+ + VLATGG GR Y   T+    TGDG  M  R G+PL+DMEFVQ+HPTG+
Sbjct: 189 DGTIHRFKSHTTVLATGGYGRAYFSCTSAHTCTGDGNGMVARAGLPLQDMEFVQFHPTGI 248

Query: 238 PGTGILMTEGCRGEGGIIVNKHGYRYLQDYGMGPETPVGQPKNKYMELGPRDKVSQAFWH 297
            G G L+TEG RGEGG + N  G R+++ Y          P  K  +L  RD VS+A   
Sbjct: 249 YGAGCLITEGARGEGGYLTNSEGERFMERYA---------PTAK--DLASRDVVSRAMTV 297

Query: 298 EQQKGNTIKHPLGDVVHLDLRHLGEEYLQERLPFICELAKAYVNVDPAKEPIPIRPTVHY 357
           E ++G  +  P  D ++L L HLG E L  RLP I E AK +  VD  ++PIP+ PTVHY
Sbjct: 298 EIREGRGV-GPKKDHINLHLEHLGPEVLHSRLPGITETAKVFSGVDATRDPIPVLPTVHY 356

Query: 358 TMGGIETN----------GECETRIKGLFAVGECASVGLHGANRLGSNSLAEFVVFGRVA 407
            MGGI TN           + E    GL AVGECA V +HGANRLG+NSL + VVFGR A
Sbjct: 357 NMGGIPTNYHGEVLNPTKADPEAIFPGLMAVGECACVSVHGANRLGTNSLLDIVVFGRAA 416

Query: 408 GEKAVERAAEFKGWNEKAIAAQVKAVE-DRIAALMQQEGDENWATIRTEMGHTMEAGCGI 466
             +A E      G   K + A    +   R+  L   +G +  A IR ++   M+    +
Sbjct: 417 ALRAAEVVK--PGIAHKPLKADAADLALSRLDRLRSAKGAKLTAEIRDDLQQAMQRDAAV 474

Query: 467 YRQEDLMQETIDKLAELKERYKRISIKDKGKVFNTDLLYAIEVGYGLDVAEAMVHSAILR 526
           +R    + E + ++ ++      I + D   +FNTDL  A+E+   +  A+  +H A  R
Sbjct: 475 FRTTKSLAEGVARVDQVAASLADIKLVDTSMIFNTDLAEALELENLMACAQTTIHGAAAR 534

Query: 527 KESRGAHQRLDEGCTERDDVQFLKHSLAFYQEGQTPKIDYSPV-------KITKSQPKAR 579
           +ESRGAH    E   +RDD  ++KH+LA+        +DY PV       +I   +PKAR
Sbjct: 535 QESRGAHAH--EDFPDRDDKTWMKHTLAWLDPKGKVTLDYRPVHTFTLTDEIDYIEPKAR 592

Query: 580 LY 581
           +Y
Sbjct: 593 VY 594