Pairwise Alignments

Query, 602 a.a., fumarate reductase (quinol) flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., succinate dehydrogenase flavoprotein subunit (RefSeq) from Shewanella loihica PV-4

 Score =  394 bits (1011), Expect = e-114
 Identities = 234/596 (39%), Positives = 347/596 (58%), Gaps = 49/596 (8%)

Query: 7   DIAVIGAGGAGLRTAIAAAEANPHLEVALISKVYPMRSHTVAAEGGSAAVIKD--EDSLD 64
           D  VIGAGGAG+R A+  ++       AL+SKV+P RSHTV+A+GG    + +  ED  +
Sbjct: 9   DAVVIGAGGAGMRAALQISKEGK--SCALLSKVFPTRSHTVSAQGGITVALGNAHEDHWE 66

Query: 65  NHFNDTVGGGDWLCEQDVVEYFVANATREMIQMEQWGCPWSRKENGEVNVRRFGGM---- 120
            H  DTV G D++ +QD +E+        +I++E  G P+SR +NG++  R FGG     
Sbjct: 67  QHMYDTVKGSDFIGDQDAIEFMCQTGPEAIIELEHMGLPFSRFDNGKIYQRPFGGQSKNF 126

Query: 121 ---KVERTWFAADKTGFHMLHTLFQTSMKYPQIKRLDEYFVVDLLVDE-GEIQGLIAIHM 176
              +  RT  AAD+TG  +LH L+Q ++K+ + +   E++ +DL+ +E G I G  AI +
Sbjct: 127 GGEQAARTAAAADRTGHALLHCLYQQNVKH-KTEVFSEWYALDLVKNEDGAIVGCTAIEI 185

Query: 177 SEGELVTIKAKSVVLATGGAGRVYHCNTNGGIVTGDGMAMAFRHGVPLRDMEFVQYHPTG 236
             GE+V  K+K+ +LATGGAGR+Y   TN  I TGDG+ MA R GV ++DME  Q+HPTG
Sbjct: 186 ETGEIVYFKSKATILATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQFHPTG 245

Query: 237 LPGTGILMTEGCRGEGGIIVNKHGYRYLQDYGMGPETPVGQPKNKYMELGPRDKVSQAFW 296
           + G G+L+TEGCRGEGG ++NK G R+++ Y          P  K  +L  RD V+++  
Sbjct: 246 IAGAGVLVTEGCRGEGGYLLNKDGERFMERYA---------PNAK--DLASRDVVARSMM 294

Query: 297 HEQQKGNTIKHPLGDVVHLDLRHLGEEYLQERLPFICELAKAYVNVDPAKEPIPIRPTVH 356
            E ++G  +  PLG    L L HLG+E L+ RLP +CEL++ + ++DPA  PIP+ PT H
Sbjct: 295 TEIREGRGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCH 354

Query: 357 YTMGGI--ETNGE--------CETRIKGLFAVGECASVGLHGANRLGSNSLAEFVVFGRV 406
           Y MGG+  + +G+         E+ + GLFAVGE A V +HGANRLG NSL + VVFGR 
Sbjct: 355 YMMGGLPAKVSGQVIRKNEDGSESDVVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRA 414

Query: 407 AGE---KAVERAAEFKGWNEKAIAAQVKAVEDRIAALMQQEGDENWATIRTEMGHTMEAG 463
           AG+   KA++  A+ K    +A A ++    +R+      +  E+ A IR ++   M+  
Sbjct: 415 AGQHLGKALDETADPK----EASADEIAKSLERLNRWESNKDGEDPAQIRKDLQLCMQLN 470

Query: 464 CGIYRQEDLMQETIDKLAELKERYKRISIKDKGKVFNTDLLYAIEVGYGLDVAEAMVHSA 523
             ++R  + M E +++L  ++ER     + D  + FNT  +  +E+   +  A A  ++A
Sbjct: 471 FSVFRTGEAMAEGLEELKAIRERLANAKLSDNSREFNTQRIECLELDNLMATAIATAYAA 530

Query: 524 ILRKESRGAHQRLDEGCTERDDVQFLKHSLAFYQEGQTPKIDYSPVKITKSQPKAR 579
             R+ESRGAH R  E   ERDD  +L HSL   Q  Q  K      +    +PK R
Sbjct: 531 NFRQESRGAHSR--EDFLERDDENWLCHSLFDPQTEQMTK------RAVNMEPKLR 578