Pairwise Alignments

Query, 602 a.a., fumarate reductase (quinol) flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., fumarate reductase flavoprotein subunit (RefSeq) from Shewanella loihica PV-4

 Score =  335 bits (858), Expect = 5e-96
 Identities = 217/617 (35%), Positives = 336/617 (54%), Gaps = 53/617 (8%)

Query: 1   MQILTTDIAVIGAGGAGLRTAIAAAEANPHLEVALISKVYPMRSHTVAAEGGSAAVIKDE 60
           M+++ TD  V+GAG AGLR AIA+ E    L+  ++S +   RSH+ AA+GG  A + + 
Sbjct: 1   MKLIYTDSLVVGAGLAGLRVAIASKERG--LDTLVLSLIPAKRSHSAAAQGGMQASLGNT 58

Query: 61  -----DSLDNHFNDTVGGGDWLCEQDVVEYFVANATREMIQMEQWGCPWSR--------- 106
                D  D HF DTV G DW C+Q+V   F   A + + ++  WG PW+R         
Sbjct: 59  VKGMGDDEDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWTRVTKGPRQVV 118

Query: 107 ------------KENGEVNVRRFGGMKVERTWFAADKTGFHMLHTLFQT--SMKYPQIKR 152
                       + +G +N R FGG K  RT + AD TG  +L+ +     S+  P  +R
Sbjct: 119 VNAEKVTIEEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNKAISLDIPVHER 178

Query: 153 LDEYFVVDLLVDEGEIQGLIAIHMSEGELVTIKAKSVVLATGGAGRVYHCNTNGGIVTGD 212
           ++    + L+ D     G++A  +  GEL    AKS  +ATGG GR+Y  +TN  I  G 
Sbjct: 179 VE---ALALIHDGKRCHGVVARCLITGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGI 235

Query: 213 GMAMAFRHGVP-LRDMEFVQYHPTGLPGTGILMTEGCRGEGGIIVNKHGYRYLQDYGMGP 271
           G A+A   GV  L +ME VQ+HPT +   GIL TEGCRG+GG++ +K G+R++ DY    
Sbjct: 236 GQALALETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGHRFMPDY---- 291

Query: 272 ETPVGQPKNKYMELGPRDKVSQAFWHEQQKGNTIKHPLGDVVHLDLRHLGEEYLQERLPF 331
                +P+ K  EL  RD VS+      +KG  +  P G  + LD+  LG ++++  L  
Sbjct: 292 -----EPEKK--ELASRDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHVETNLRE 344

Query: 332 ICELAKAYVNVDPAKEPIPIRPTVHYTMGGIETNGECET-RIKGLFAVGECASVGLHGAN 390
           + E+ + ++ +DPA++ IP+RPT HY+MGGI T+ + ++ ++KGLF+VGE A   +HG N
Sbjct: 345 VKEICENFLGIDPAEDWIPVRPTQHYSMGGIRTDAKGQSPQLKGLFSVGEAACWDMHGFN 404

Query: 391 RLGSNSLAEFVVFGRVAGEKAVERAAEFKGWNEKAIAAQ-VKAVEDRIAALMQQEGDENW 449
           RLG NSLAE VV G + G+   +   E     + ++A + V  V D I  L++ +G E+ 
Sbjct: 405 RLGGNSLAETVVGGMIIGKYVADFCEENTLEIDTSLAERFVAQVRDEIDGLVEGQGSESA 464

Query: 450 ATIRTEMGHTMEAGCGIYRQEDLMQETIDKLAELKERYKRISIKDKGKVFNTDLLYAIEV 509
             ++ EM   M    GI+R    + + +++L  L  R + + +K K +  N +L+ A+ V
Sbjct: 465 YELKREMQRIMMDYVGIFRNGPELSKAVEELEALLIRSRNLGLKCKKRHANPELVEALRV 524

Query: 510 GYGLDVAEAMVHSAILRKESRGAHQRLDEGCTERDDVQFLKHSLAFYQ--EGQTPKIDYS 567
              L VA  +   A  R ESRGAH R  E   +R+D ++L  +L+ +   +   P++DY 
Sbjct: 525 KRMLKVALTVACGAEARTESRGAHAR--EDYPQRNDKEWLNRTLSSWPSVDATRPQLDYE 582

Query: 568 PVKITKSQ--PKARLYG 582
            + + K +  P  R YG
Sbjct: 583 QLDVMKMELPPGYRGYG 599