Pairwise Alignments

Query, 602 a.a., fumarate reductase (quinol) flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., fumarate reductase flavoprotein subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  338 bits (868), Expect = 3e-97
 Identities = 222/617 (35%), Positives = 329/617 (53%), Gaps = 53/617 (8%)

Query: 1   MQILTTDIAVIGAGGAGLRTAIAAAEANPHLEVALISKVYPMRSHTVAAEGGSAAVIKDE 60
           M+++ TD  V+GAG AGLR AIA+ E    L+  ++S +   RSH+ AA+GG  A + + 
Sbjct: 1   MKLIYTDSLVVGAGLAGLRVAIASKERG--LDTLVLSLIPAKRSHSAAAQGGMQASLGNA 58

Query: 61  -----DSLDNHFNDTVGGGDWLCEQDVVEYFVANATREMIQMEQWGCPWSR--------- 106
                D  D HF DTV G DW C+Q+V   F   A + + ++  WG PWSR         
Sbjct: 59  VKGMGDDEDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWSRVSAGPREVI 118

Query: 107 ------------KENGEVNVRRFGGMKVERTWFAADKTGFHMLHTLFQT--SMKYPQIKR 152
                       + +G +N R FGG K  RT + AD TG  +L+ +     SM  P  +R
Sbjct: 119 VNAQKVTLQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAISMDIPVHER 178

Query: 153 LDEYFVVDLLVDEGEIQGLIAIHMSEGELVTIKAKSVVLATGGAGRVYHCNTNGGIVTGD 212
           ++    + L+ D     G++A  +  GEL    AKS  +ATGG GR+Y  +TN  I  G 
Sbjct: 179 VE---ALALIHDGERCHGVVARCLISGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGI 235

Query: 213 GMAMAFRHGVP-LRDMEFVQYHPTGLPGTGILMTEGCRGEGGIIVNKHGYRYLQDYGMGP 271
           G A+A   GV  L +ME VQ+HPT +   GIL TEGCRG+GG++ +K GYR++ DY    
Sbjct: 236 GQALALETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDY---- 291

Query: 272 ETPVGQPKNKYMELGPRDKVSQAFWHEQQKGNTIKHPLGDVVHLDLRHLGEEYLQERLPF 331
                +P+ K  EL  RD VS+      +KG  +  P G  + LD+  LG ++++  L  
Sbjct: 292 -----EPEKK--ELASRDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLRE 344

Query: 332 ICELAKAYVNVDPAKEPIPIRPTVHYTMGGIETNGECET-RIKGLFAVGECASVGLHGAN 390
           + E+ + ++ +DPAK+ IP+RPT HY+MGGI T    E+ ++KGLF+VGE A   +HG N
Sbjct: 345 VQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTKATGESPQLKGLFSVGEAACWDMHGFN 404

Query: 391 RLGSNSLAEFVVFGRVAGEKAVERAAEFKGWNEKAIAAQ-VKAVEDRIAALMQQEGDENW 449
           RLG NSLAE VV G + G+   +            +A Q ++ V+  I  L+  +G E+ 
Sbjct: 405 RLGGNSLAETVVGGMIIGKYIADFCENNSLEINTTLAEQFMRQVQTEIDTLVDGDGHESP 464

Query: 450 ATIRTEMGHTMEAGCGIYRQEDLMQETIDKLAELKERYKRISIKDKGKVFNTDLLYAIEV 509
             ++  M   M    GI+R    + + + +L  L ER +++ IK K +  N +L+ A+ V
Sbjct: 465 FELKHAMQRIMMDYVGIFRNGPELDKAVTELKALLERSRKLGIKCKKRHANPELVEALRV 524

Query: 510 GYGLDVAEAMVHSAILRKESRGAHQRLDEGCTERDDVQFLKHSLAFYQEGQT--PKIDYS 567
              L VA  +   A  R ESRGAH R  E   +R+D  +L  +LA + +     P + Y 
Sbjct: 525 KRMLKVALTVACGAAARTESRGAHAR--EDYPQRNDRDWLNRTLASWPDANALEPVLSYE 582

Query: 568 PVKITKSQ--PKARLYG 582
           P+ + K +  P  R YG
Sbjct: 583 PLDVMKMELPPGYRGYG 599