Pairwise Alignments

Query, 324 a.a., elongation factor P--(R)-beta-lysine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., aspartyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score = 47.4 bits (111), Expect = 9e-10
 Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 14/115 (12%)

Query: 212 YDFPASQAALAKINPADP--RVADRFEVYFKGIELANGFHELDNPAEQLARFKA----DN 265
           + F A +   A    A P   V+D +++   G+EL  G   + N   Q   F+     D 
Sbjct: 449 HPFTAPRGVTAAELEASPGKAVSDAYDMVLNGVELGGGSVRIHNGDMQSTVFRILGIDDE 508

Query: 266 AKRLEMGLTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320
             + + G         L+ AL  G P  AG+A G+DRL+ML  G   I  V AFP
Sbjct: 509 EAKEKFGF--------LLDALRFGTPPHAGLAFGLDRLVMLMTGASSIRDVMAFP 555



 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 19/221 (8%)

Query: 18  RATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYA-KGSALHLMTSP 76
           RA +   +R F      L++ETP ++ AT           +++ P    KG    L  SP
Sbjct: 143 RAKVTSFVRRFMDGNGFLDIETPILTKATPEGAR------DYLVPSRTYKGQFFALPQSP 196

Query: 77  EFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALLQ- 135
           +   + L+ +G    YQ+ K FR+E+      PEFT ++          +M+  + +++ 
Sbjct: 197 QLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSDQVMETTERMIRN 256

Query: 136 -----LVLRCGSAERMTYQEAFLNVLGVCPLEEEMRELKQVAATLG------LSDIAEPE 184
                + +  G   +MT+ EA        P      EL  VA  L        S  A  E
Sbjct: 257 LFLELMNVDLGDFPKMTWDEAMRRFGSDKPDLRNPLELVDVADLLKAVEFAVFSGPANDE 316

Query: 185 EDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKIN 225
           E R   L++     +  K       FV  + A   A  K+N
Sbjct: 317 EGRVAALRIPGGAELSRKQIDDYTKFVGIYGARGLAWMKVN 357