Pairwise Alignments

Query, 324 a.a., elongation factor P--(R)-beta-lysine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., lysyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  129 bits (325), Expect = 1e-34
 Identities = 107/333 (32%), Positives = 161/333 (48%), Gaps = 38/333 (11%)

Query: 18  RATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMTSPE 77
           R+ ++  IR F   +  +EVETP M H+         F T       A    ++L  +PE
Sbjct: 176 RSKVVTAIRNFMVSKEFMEVETPMM-HSIPGGASARPFITHH----NALDIEMYLRIAPE 230

Query: 78  FHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALLQLV 137
            ++KRL+  G   ++++ + FRNE     HNPEFTM+E+Y    D+  LMD  + +L  +
Sbjct: 231 LYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSI 290

Query: 138 LRC-----------------GSAERMTYQEAFL-----NVLGVCPLEEEMRE---LKQVA 172
            +                  G  ER++  +A       N        EE+++   ++ +A
Sbjct: 291 AKDLLGDTKLPYGEHTIDFGGPYERLSMLDAIKKYNPDNETIQSMTYEEVKDVEFMRNLA 350

Query: 173 ATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRVA 232
            +LG++   E       LL+ +F    EPK+ Q  P F+  +PA  + LA+ N  +  + 
Sbjct: 351 KSLGMT--IEKFWTCGQLLEEIFGETAEPKLMQ--PTFITGYPADISPLARRNDENHFIT 406

Query: 233 DRFEVYFKGIELANGFHELDNPAEQLARFKAD-NAKRLEMGLTEQPI-DYHLIAALEAGL 290
           DRFE +  G E+ANGF EL++  +Q  RFKA  +AK  + G  E    D   I ALE GL
Sbjct: 407 DRFEFFIGGREVANGFSELNDAEDQDKRFKAQVDAK--DAGDDEAMFYDADYITALEHGL 464

Query: 291 PECAGVALGIDRLIMLALGEDHIDKVTAFPFPR 323
           P  AG  +GIDRL+ML      I  V  FP  R
Sbjct: 465 PPTAGQGIGIDRLVMLFTNTHTIRDVILFPAMR 497