Pairwise Alignments

Query, 324 a.a., elongation factor P--(R)-beta-lysine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., aspartyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 11/99 (11%)

Query: 225 NPADPRVADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYH--- 281
           NPA+ RV+D +++   G EL  G   + N   Q A F+        +G+T++        
Sbjct: 465 NPAN-RVSDAYDMVLNGCELGGGSVRIHNQEMQSAVFRI-------LGITDEEAKEKFGF 516

Query: 282 LIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFP 320
           L+ AL  G P  AG+A G+DR+IML  G   I  V AFP
Sbjct: 517 LLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFP 555



 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 19/225 (8%)

Query: 14  QLKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYA-KGSALHL 72
           +L  RA +   +R F      L++ETP ++ AT           +++ P    KG    L
Sbjct: 139 RLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGAR------DYLVPSRTYKGQFFAL 192

Query: 73  MTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDA 132
             SP+   + L+ +G    YQ+ K FR+E+      PEFT ++          +M++ + 
Sbjct: 193 PQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQVMNKTEE 252

Query: 133 LLQ------LVLRCGSAERMTYQEAFLNVLGVCPLEEEMRELKQVAATLG------LSDI 180
           +++      L +  G   RMTY EA        P      EL  VA  L        S  
Sbjct: 253 MMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADLLKDVEFAVFSGP 312

Query: 181 AEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKIN 225
           A  EE R   L++     +  K       FV  + A   A  K+N
Sbjct: 313 ANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLN 357