Pairwise Alignments

Query, 324 a.a., elongation factor P--(R)-beta-lysine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., lysyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  128 bits (321), Expect = 3e-34
 Identities = 105/330 (31%), Positives = 161/330 (48%), Gaps = 32/330 (9%)

Query: 18  RATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMTSPE 77
           R+ ++  IR F  ++  +EVETP M H          F T       A    ++L  +PE
Sbjct: 176 RSKVVAAIRNFMIKKEFMEVETPMM-HVIPGGASARPFITHH----NALDMPMYLRIAPE 230

Query: 78  FHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL-QL 136
            ++KRL+  G   ++++ + FRNE     HNPEFTM+E+Y    D+  LMD  + LL  +
Sbjct: 231 LYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYQDLMDLTEELLSSI 290

Query: 137 VLRCGSAERMTYQEAFLNVLGV---CPLEEEMRELKQVAATLGLSDIAEPEEDRDTLLQL 193
            +    + +M Y E  ++  G      + E +++     AT+      E  +D + + +L
Sbjct: 291 AIELLGSAQMPYGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTY-EQVKDLEFMREL 349

Query: 194 LFSIGIEPK----IGQI--------------TPAFVYDFPASQAALAKINPADPRVADRF 235
             S+GI+ +     GQ+               P F+  +PA  + LA+ N  +  + DRF
Sbjct: 350 AISLGIKIEKFWTCGQLLEEIFGETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRF 409

Query: 236 EVYFKGIELANGFHELDNPAEQLARFKAD-NAKRLEMGLTEQPI-DYHLIAALEAGLPEC 293
           E +  G E+ANGF EL++  +Q +RFKA  +AK  + G  E    D   I ALE GLP  
Sbjct: 410 EFFIGGREVANGFSELNDAQDQDSRFKAQVDAK--DAGDDEAMFYDADYITALEHGLPPT 467

Query: 294 AGVALGIDRLIMLALGEDHIDKVTAFPFPR 323
           AG  +GIDRL+ML      I  V  FP  R
Sbjct: 468 AGQGIGIDRLVMLFTNTHTIRDVILFPAMR 497