Pairwise Alignments

Query, 154 a.a., protein-export protein SecB from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., preprotein translocase subunit SecB (RefSeq) from Shewanella loihica PV-4

 Score =  213 bits (542), Expect = 1e-60
 Identities = 109/162 (67%), Positives = 124/162 (76%), Gaps = 8/162 (4%)

Query: 1   MAEAAQAPQQ--QFAIQRIYLKDVSFEAPSSPVMFQKEWNPDVKLDLDTQSRELGQGVYE 58
           MAEA    QQ  QF IQR+Y KD+SFE P+SP +FQKEWNP+VKLDLDT+S +L   VYE
Sbjct: 1   MAEAVNNEQQGPQFNIQRVYTKDISFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYE 60

Query: 59  VVLRLTVTVKNAEETAFLCEVQQAGIFSAEQMEAGQLAHCLGAFCPNILFPYARETISSL 118
           VVL LTVT KN EETAFLCEVQQAGIF+   +   QLAH LGA+CPN+LFPYARE + SL
Sbjct: 61  VVLSLTVTAKNGEETAFLCEVQQAGIFAISGLTDQQLAHSLGAYCPNVLFPYAREAVGSL 120

Query: 119 VVKGTFPQLNLAPVNFDALFMNYLQQQ------AQEGATANA 154
           V +GTFPQLNLAPVNFDALF  Y+QQ+      A E A ANA
Sbjct: 121 VARGTFPQLNLAPVNFDALFAQYVQQRQAQAEAAGEAAEANA 162