Pairwise Alignments

Query, 154 a.a., protein-export protein SecB from Vibrio cholerae E7946 ATCC 55056

Subject, 157 a.a., protein-export protein SecB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  209 bits (532), Expect = 2e-59
 Identities = 109/157 (69%), Positives = 121/157 (77%), Gaps = 3/157 (1%)

Query: 1   MAEAAQAPQQ--QFAIQRIYLKDVSFEAPSSPVMFQKEWNPDVKLDLDTQSRELGQGVYE 58
           MAE A   QQ  QF IQR+Y KDVSFE P+SP +FQKEWNP+VKLDLDT+S +L   VYE
Sbjct: 1   MAEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYE 60

Query: 59  VVLRLTVTVKNAEETAFLCEVQQAGIFSAEQMEAGQLAHCLGAFCPNILFPYARETISSL 118
           VVL LTVT +N  ETAFLCEVQQAGIFS   +   QLAH LGA+CPNILFPYARE + SL
Sbjct: 61  VVLSLTVTAQNGGETAFLCEVQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSL 120

Query: 119 VVKGTFPQLNLAPVNFDALFMNYLQQ-QAQEGATANA 154
           V +GTFPQLNLAPVNFDALF  Y+QQ QA     ANA
Sbjct: 121 VGRGTFPQLNLAPVNFDALFAQYVQQRQAAAAEEANA 157