Pairwise Alignments

Query, 154 a.a., protein-export protein SecB from Vibrio cholerae E7946 ATCC 55056

Subject, 161 a.a., preprotein translocase subunit SecB (RefSeq) from Shewanella sp. ANA-3

 Score =  209 bits (532), Expect = 2e-59
 Identities = 109/156 (69%), Positives = 122/156 (78%), Gaps = 3/156 (1%)

Query: 1   MAEAAQAPQQ--QFAIQRIYLKDVSFEAPSSPVMFQKEWNPDVKLDLDTQSRELGQGVYE 58
           MAE A   QQ  QF IQR+Y KDVSFE P+SP +FQKEWNP+VKLDLDT+S +L   VYE
Sbjct: 1   MAEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYE 60

Query: 59  VVLRLTVTVKNAEETAFLCEVQQAGIFSAEQMEAGQLAHCLGAFCPNILFPYARETISSL 118
           VVL LTVT +NA ETAFLCEVQQAGIFS   +   QLAH LGA+CPNILFPYARE + SL
Sbjct: 61  VVLSLTVTAQNAGETAFLCEVQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSL 120

Query: 119 VVKGTFPQLNLAPVNFDALFMNYLQQQAQEGATANA 154
           V +GTFPQLNLAPVNFDALF  Y+QQ+ Q  A A A
Sbjct: 121 VGRGTFPQLNLAPVNFDALFAQYVQQR-QAAAAAPA 155