Pairwise Alignments

Query, 378 a.a., acetylornithine deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella loihica PV-4

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 34/244 (13%)

Query: 37  LADWLSALGFSIQIEQVAPNKQNLIAKLGSGEGGLLLAGHSDTVP-FDEGRWNYNPHALT 95
           L + L A+GF +   Q      NL+A        L LAGH+D VP  D  RW   P A T
Sbjct: 24  LGERLVAMGFDVSHYQ-DKGVSNLLASFDERPAQLALAGHTDVVPPGDLSRWQTPPFAAT 82

Query: 96  QVNNRFYGLGTADMKGFFAFIYEAVKN---------VDWSKQTKPLYVLATCDEETTMLG 146
            V+    G G  DMK   A +  AV++          +W       +++ + +E     G
Sbjct: 83  LVDGMLIGRGAVDMKSGLAVMLAAVEDHIACYGLPKANWQ------FIVTSDEEGEAEHG 136

Query: 147 ARHFTENAPFK---PDYCIIGEPTS------LVPIRAHKGHVANAIRVTGKSGHSSNPAL 197
            R   E    +   P YC++ EPT+      ++ I   +G ++  + + GK GH + P  
Sbjct: 137 TRTLVERLKAQSRLPKYCVVAEPTADKQAGDVIKI-GRRGAISARLTLKGKQGHVAYPKN 195

Query: 198 GVNAIEIMHEVLFALMQLRDRLIKEYHHPGFEIPTPTLNLGHIHGGD-SPNRICGCCELH 256
            VNA+ +   V+ AL  L       +     + P  +L + H+  G  + N + G CE+ 
Sbjct: 196 AVNALHMAARVMQALEAL------IWDEGSDDFPGTSLQVTHVDSGAFTDNIVPGSCEIC 249

Query: 257 YDVR 260
           +++R
Sbjct: 250 FNIR 253