Pairwise Alignments

Query, 378 a.a., acetylornithine deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella loihica PV-4

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 77/268 (28%), Positives = 119/268 (44%), Gaps = 29/268 (10%)

Query: 7   LEVYEGLISTSSISSTDARWDEGNEQVIAKLADWLSALGFSIQIEQVAPNKQNLIAKLGS 66
           L + + LI+ +S++  D    EG + ++AK    L+A GF+I+   V  +  N+ A+ G 
Sbjct: 6   LTLAQDLIARASVTPLD----EGCQPLMAKR---LAAKGFNIE-PMVFEDTTNMWARRGD 57

Query: 67  GEGGLLLAGHSDTVPF-DEGRWNYNPHALTQVNNRFYGLGTADMKGFFAFIYEAVKN-VD 124
                  AGH+D VP  D  RW+  P     ++   +G G ADMKG  A +  A +  VD
Sbjct: 58  QGPLFCFAGHTDVVPVGDLNRWHTPPFEPVVIDGYLHGRGAADMKGSLAAMVVATERFVD 117

Query: 125 WSKQTK-PLYVLATCDEETTMLGAR----HFTENAPFKPDYCIIGEPTSL-----VPIRA 174
                K  +  L T DEE   +          E    K  + ++GEP+S      +    
Sbjct: 118 KHPDHKGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWSLVGEPSSTHKLGDIVKNG 177

Query: 175 HKGHVANAIRVTGKSGHSSNPALGVNAIEIMHEVLFALMQLRDRLIKEYHHPGFEIPTPT 234
            +G +   + V G  GH + P L  N I   H+   AL    D L +     G E   PT
Sbjct: 178 RRGSLTGNLTVKGVQGHVAYPHLADNPI---HKAAPAL----DELARMKWDNGNEFFPPT 230

Query: 235 -LNLGHIHGG-DSPNRICGCCELHYDVR 260
              + +I+GG  + N I G  E+ ++ R
Sbjct: 231 SFQIANINGGTGASNVIPGSLEVMFNFR 258