Pairwise Alignments

Query, 378 a.a., acetylornithine deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., acetylornithine deacetylase (RefSeq) from Shewanella loihica PV-4

 Score =  390 bits (1002), Expect = e-113
 Identities = 185/377 (49%), Positives = 259/377 (68%), Gaps = 3/377 (0%)

Query: 4   PSFLEVYEGLISTSSISSTDARWDEGNEQVIAKLADWLSALGFSIQIEQVAPN--KQNLI 61
           P   + +  LI+T SIS+ +A  D  N+ V+  L+ WL+ LGF  Q++ V     K NL+
Sbjct: 6   PDIKQSFRELIATPSISALEAELDMSNQGVVTLLSQWLTDLGFDCQMQAVPDTRGKHNLL 65

Query: 62  AKLGSGEGGLLLAGHSDTVPFDEGRWNYNPHALTQVNNRFYGLGTADMKGFFAFIYEAVK 121
           AK+G G GGLLLAGH+DTVPFDEGRW+ +P  LT+ +NR+YGLG+ DMKGFFA + EAV+
Sbjct: 66  AKIGQGRGGLLLAGHTDTVPFDEGRWSQDPFTLTEKDNRWYGLGSCDMKGFFALVIEAVR 125

Query: 122 NVDWSKQTKPLYVLATCDEETTMLGARHFTENAPFKPDYCIIGEPTSLVPIRAHKGHVAN 181
            +      +PLY+LA+ DEETTM GA+ F ++    P+Y +IGEPT L P+  HKGH+A 
Sbjct: 126 QMPTQDFVRPLYILASADEETTMNGAKAFAQSKAIAPEYALIGEPTGLKPVYMHKGHLAQ 185

Query: 182 AIRVTGKSGHSSNPALGVNAIEIMHEVLFALMQLRDRLIKEYHHPGFEIPTPTLNLGHIH 241
            IR+TG+SGHSS+PA G+NAIEIMH+V+  L++L+  L + Y    F +P PT+N GHIH
Sbjct: 186 GIRITGRSGHSSDPAKGLNAIEIMHQVIGQLLKLKQHLAEHYREEAFSVPYPTMNFGHIH 245

Query: 242 GGDSPNRICGCCELHYDVRPLPGISLDGLDNLMHDALREVQQKWPGRIELVPLHDPIPGY 301
           GGD+ NRICGCC+LH D+RPLPG+ L+ L+ L+   L E+ Q++PG I +  L+     +
Sbjct: 246 GGDAANRICGCCDLHLDIRPLPGLPLEVLEQLLTQYLAELSQRYPGSISISQLYPGSQPF 305

Query: 302 ECAHDHPFIHGISEICEQEAQTVNYCTEAPFLQQV-CPTLVLGPGSIDQAHQPDEFLAFE 360
               D  +   ++++  Q  + VNY TEAP++QQ+ C TLV GPGSI+QAHQPDE+L   
Sbjct: 306 AGQADAQWSQLVAQLSNQAPEVVNYATEAPYIQQLGCQTLVWGPGSIEQAHQPDEYLDTA 365

Query: 361 FIDPTVRVLSRAMQKYC 377
           +I+ TV +L + +   C
Sbjct: 366 YINKTVDLLKQLIYHAC 382