Pairwise Alignments

Query, 378 a.a., acetylornithine deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., succinyl-diaminopimelate desuccinylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 27/266 (10%)

Query: 8   EVYEGLISTSSISSTDARWDEGNEQVIAKLADWLSALGFSIQIEQVAPNKQNLIAKLGSG 67
           E+ + LI+  S++  D    EG + +   +A+ L+A+GF+I+   V  +  N+ A+ G+ 
Sbjct: 15  ELTKALIARPSVTPLD----EGCQTL---MAERLAAIGFNIEA-MVFEDTTNMWARRGNT 66

Query: 68  EGGLLLAGHSDTVPF-DEGRWNYNPHALTQVNNRFYGLGTADMKGFFAFIYEAVKNVDWS 126
                 AGH+D VP  D  RW+  P   T ++   YG G ADMKG  A +  A +     
Sbjct: 67  GPVFCFAGHTDVVPTGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMVVATERFVAK 126

Query: 127 KQTKP--LYVLATCDEETTMLGAR----HFTENAPFKPDYCIIGEPTSLVPI-----RAH 175
               P  +  L T DEE   +          E    K  + ++GEP+S + +        
Sbjct: 127 HPNHPGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTLKLGDVVKNGR 186

Query: 176 KGHVANAIRVTGKSGHSSNPALGVNAIEIMHEVLFALMQLRDRLIKEYHHPGFEIPTPTL 235
           +G +   + V G  GH + P L  N I      L  L Q        + +     P  ++
Sbjct: 187 RGSLTANLTVKGVQGHVAYPHLADNPIHKAAPFLAELSQ------THWDNGNAFFPPTSM 240

Query: 236 NLGHIHGG-DSPNRICGCCELHYDVR 260
            + +I+GG  + N I G  E+ ++ R
Sbjct: 241 QIANINGGTGASNVIPGALEVMFNFR 266