Pairwise Alignments

Query, 484 a.a., dihydrolipoyl dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  144 bits (362), Expect = 9e-39
 Identities = 120/470 (25%), Positives = 210/470 (44%), Gaps = 30/470 (6%)

Query: 3   QIHVDVAVIGGGTAGLGA-YRAAKAYTPNVVMIEGGPYGTTCARVGCMPSKLLIAAAESV 61
           +I   V V+G G AG  A +RAA      V++      G  C  VGC+PSK L+  A+ +
Sbjct: 4   EIKTQVVVLGAGPAGYSAAFRAADLGLETVIVERFSTLGGVCLNVGCIPSKALLHVAKVI 63

Query: 62  HQIEKAPGFGVYPQGEIVINGREVMDRVKRERDRFVGFVLEGVDSIPEQDKIT---GYAK 118
            + +     GV   GE  I+    +D+++  + + +  +  G+  + +  K+    G+ K
Sbjct: 64  EEAKAVAAHGVV-FGEPTID----LDKLRSFKQKVISQLTGGLGGMSKMRKVNVVNGFGK 118

Query: 119 FIDNHTLQVDDH----TRIHAKRIVIATGSRPAYPAVWNELGDRLVVNDDVFEWDDLPQA 174
           F   ++L+V       T +   + +IA GSRP           R+  + D  E  ++P  
Sbjct: 119 FSGPNSLEVTAEDGTVTVVKFDQAIIAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGK 178

Query: 175 VAVFGPGVIGLELGQSLHRLGVKVKVFGLGGQVGPLTDPDVMAYANRAFQQEFYLDADVK 234
           + V G G+IGLE+G     LG ++ V  +  QV P  D DV+    +  +++F L  + K
Sbjct: 179 LLVMGGGIIGLEMGTVYSSLGSEIDVVEMFDQVIPAADKDVVRVFTKQIKKKFNLILETK 238

Query: 235 VESMKRIAGDKVEIQFINQQGELETFIVDYVLAATGRRPNVDKLALDNTDVALDERGVPK 294
           V +++    D + +    +    E    D VL A GR PN   +  +   V +DERG   
Sbjct: 239 VTAVE-AREDGIYVSMEGKSAPAEPVRYDAVLVAIGRTPNGKLIDAEKAGVKIDERGFIN 297

Query: 295 ADHYTLQTSVPSIFIAGDASNQIPLLHEAADQGRIAGDNAGRFPDIRAGLR-----RSPI 349
            D   L+T+VP I+  GD   Q  L H+   +G +A        ++ AG++     +   
Sbjct: 298 VDK-QLRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAA-------EVIAGMKHYFDPKVIP 349

Query: 350 SAVFSDPQIAMVGETYKQLTQRLGNCGCFAVGEVSFENQGRSRVMLRNKGLLHVYGEQGT 409
           S  ++DP++A VG T K+  ++      +      +   GR+     ++G+  +  ++ T
Sbjct: 350 SIAYTDPEVAWVGLTEKEAKEQ---GIAYETATFPWAASGRAIASDCSEGMTKLIFDKDT 406

Query: 410 GRFLGAEMMGPNAEHLAHLLAWAHQNQMTISQMLDMPFYHPVIEEGVRTA 459
            R +G  ++G N   L   +  A +       +      HP + E V  A
Sbjct: 407 HRVIGGAIVGVNGGELLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLA 456