Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator YnfL from Pseudomonas fluorescens FW300-N2E2

 Score =  114 bits (284), Expect = 4e-30
 Identities = 89/293 (30%), Positives = 142/293 (48%), Gaps = 11/293 (3%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M +R   Y +A+A+  HF +AA A  +SQP LS QI+ LE EIG  L ER++RRV  +EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAALALGISQPPLSQQIQALEQEIGARLFERTNRRVELSEA 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPY--LLPKIIPTLKERFP 118
           G   +++A+++L +V    D+A +      G L IGF  +  P+   +P+ I + ++RFP
Sbjct: 61  GRLFLEEARRVLVQVDKAADVARRAQLGELGELKIGFTSS-APFNSTIPQAIFSFRQRFP 119

Query: 119 ELELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAAR 178
            + L L E  + Q+   L +  ++  ++  +      +EIEL  E L   +   H  A  
Sbjct: 120 AVHLNLREMSSTQVADALVDEVIEVGIMRPLPLPDALREIELSREPLVAVLSAKHPLAQG 179

Query: 179 DE----VDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAG 234
           +E    +  L  +         G  L  Q L     AG       +A    T+  +VAAG
Sbjct: 180 NEEGLFLSALAQEPFVFFPRSYGSGLYAQLLNLARDAGFSPHFAQEAGEAMTIIGLVAAG 239

Query: 235 AGITLLPELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPG--SPLRQRFEQL 285
            G+++LP  A  +    DGV Y   ++P     + L  R    SP+ + F +L
Sbjct: 240 LGVSVLP--ASYQRMRIDGVVYRPLLDPAAVSAVWLVQRKDQRSPMAKGFVEL 290