Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  203 bits (516), Expect = 5e-57
 Identities = 108/294 (36%), Positives = 170/294 (57%), Gaps = 4/294 (1%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M + +  Y+V LA  +HF +AAE C VSQPTLS  ++KLEDE+G  + ER+   V  T  
Sbjct: 1   MTLTELRYIVTLAQEQHFGRAAERCHVSQPTLSVGVKKLEDELGVLIFERTKSAVRLTPV 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120
           G  +V QA+K+L + ++ +++A      +  PL +G I T+GPY+ P +IP L    P++
Sbjct: 61  GEGIVTQAQKVLEQAQSIRELAQVGKNQLAAPLKVGAIYTVGPYMFPHLIPQLHRVAPDM 120

Query: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180
            LY+ E  T+ L  +L  G+LD +++A   + A      LY+E   + +P DH W A++ 
Sbjct: 121 PLYIEENFTHILRDKLRTGELDAIIVALPFQEADVLTKPLYDEPFYVLMPADHPWTAKET 180

Query: 181 VDMLELKGKTVLALGDGHCLRDQALGFC---FAAGAKDDERFKATSLETLRNMVAAGAGI 237
           +D   L  K++L LG+GHC RDQ L  C       A      +++SLET+R+MVA+G G+
Sbjct: 181 IDAEMLNDKSLLLLGEGHCFRDQVLEACPTTRKGEAPSHTTVESSSLETIRHMVASGLGV 240

Query: 238 TLLPELALPEDKTKDGVCYLRAVN-PIPSRRLVLAYRPGSPLRQRFEQLAEVIK 290
           ++LP  A+       GV  +R +  P+P R + +A+R   P  +  E LA+ I+
Sbjct: 241 SILPLSAVESHHYSPGVLEIRPLTPPVPFRTVAIAWRASFPRPKAIEILADSIR 294