Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  112 bits (279), Expect = 1e-29
 Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 25/300 (8%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M +R   Y VA+A+  HF +AAE   +SQP LS QI+ LE E+G  L +R++RRV  T+A
Sbjct: 1   MELRHLRYFVAVAEELHFGRAAEQLRISQPPLSQQIQALEQELGVRLFDRTNRRVALTDA 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPY--LLPKIIPTLKERFP 118
           G   +++ ++ L++V    D+A +      G L +GF  +  P+  +LP+ I   +  FP
Sbjct: 61  GRLFLEETRRTLAQVDKSVDVARRAEQGEIGELKVGFTSS-APFTSILPRAILAFRRTFP 119

Query: 119 ELELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWA-A 177
            + L L E  + Q+V  +++  L   ++      A  + +EL++E L   +   H  A A
Sbjct: 120 AVHLDLQEMTSKQVVDAVQDETLQVGMIRPFALPAGLQTVELFSEPLVALMHAGHRLADA 179

Query: 178 RDEVDMLELKGKTVLALGD----------GHCLRDQALGFCFAAGAKDDERFKATSLETL 227
            DE       G T+  L D          G  L DQ L     AG       +A    T+
Sbjct: 180 GDE-------GLTLADLADEPFVFFPRSYGTGLYDQLLSLARRAGFNPRIAQEANEALTI 232

Query: 228 RNMVAAGAGITLLPELALPEDKTKDGVCYLRAVNPIPSRRLVLAYR--PGSPLRQRFEQL 285
             +VAAG G+++LP  A  +    DGV +   ++   +  + L  R    SPL Q F +L
Sbjct: 233 IGLVAAGLGVSVLP--ASFQRIRIDGVRFRTLLDKDATTAVWLVKRRQEQSPLAQAFMEL 290