Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  207 bits (528), Expect = 2e-58
 Identities = 115/293 (39%), Positives = 169/293 (57%), Gaps = 7/293 (2%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M + +  Y+V LA  +HF  AAE C VSQPTLS  ++KLEDE+G  + ERS   V  T  
Sbjct: 1   MTLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPV 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120
           G  +V QA+K+L + +  +++A      +T PL +G I T+GPYL P +IP L    P++
Sbjct: 61  GEGIVAQAQKVLEQAQGIRELAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQM 120

Query: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180
            LY+ E  T+ L  +L  G+LD +++A     A    + LY+E  S+ +P DH W  ++ 
Sbjct: 121 PLYIEENFTHVLRDKLRNGELDAVIIALPFNEADVLTLPLYDEPFSVLMPADHPWTQKET 180

Query: 181 VDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKAT-----SLETLRNMVAAGA 235
           +D   L  K++L LG+GHC RDQ L  C   G K +E  K T     SLET+R+MVA+G 
Sbjct: 181 IDASALNDKSLLLLGEGHCFRDQVLEACPTLG-KGNEGAKHTTVESSSLETIRHMVASGL 239

Query: 236 GITLLPELALPEDKTKDGVCYLRAVN-PIPSRRLVLAYRPGSPLRQRFEQLAE 287
           GI++LP  A+       GV  +R +  P+P R + +A+R   P  +  E LA+
Sbjct: 240 GISILPLSAVDSHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILAD 292