Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  111 bits (277), Expect = 2e-29
 Identities = 88/290 (30%), Positives = 136/290 (46%), Gaps = 3/290 (1%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M IR   Y  A+A H +F  AAE+  V+QP LS QIR LE EIGT L ER++RRV  T A
Sbjct: 1   MEIRHLRYFAAVARHLNFTAAAESLGVAQPPLSQQIRDLEAEIGTPLFERTTRRVALTRA 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120
           G   + QA  IL         A        G L++G   ++    L + I      +P +
Sbjct: 61  GEDFLKQALAILERADNAVQRARSIGAGTAGILNVGLTGSVLTGPLGRAIQQFALNYPNV 120

Query: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180
           +L +HE   ++ V  L+ G+ D   L    + A       + E + + +P  HA +AR +
Sbjct: 121 DLRIHEMSPDRQVAALKSGQTDVSFLRCPPQDAEIASELAWRESVRLVLPKGHALSAR-K 179

Query: 181 VDMLELKGKTVLALGDGHCLRDQAL-GFCFAAGAKDDERFKATSLETLRNMVAAGAGITL 239
           V + +L+ ++ + L     L  + L   CF AG       +A    +L ++VAAG G+ +
Sbjct: 180 VTLADLRDESFVFLRLEDSLFAKYLWQCCFEAGYAPRVTHQAIESTSLTSLVAAGLGVAI 239

Query: 240 LPELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVI 289
           +PE  + +    D V    A  PI +    L     +PL  +F  L + +
Sbjct: 240 IPEF-VSKLAHPDVVYRPIAGPPISADVHALTTAANNPLASQFIALVQTL 288