Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens SBW25-INTG

 Score =  119 bits (299), Expect = 6e-32
 Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 15/294 (5%)

Query: 3   IRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEAGL 62
           + D    V +A+   F +AA+A  +SQP LS +++KLE+ +GT LL+R++RRV  T  G 
Sbjct: 5   LNDIRSFVKIAELGSFHEAADALHLSQPALSRRMKKLEEGLGTALLDRTTRRVSLTSVGR 64

Query: 63  QLVDQAKKILSE----VKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFP 118
             + +A+++L +    V   +++A +Q+G +T    +  IPT   Y LP +I    ER+P
Sbjct: 65  DFLPKARRLLDDFDDSVLNIRELAERQSGRVT----LACIPTAAFYFLPSVIRLYNERYP 120

Query: 119 ELELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAAR 178
           ++ + L +   N+ +  +  G+ D  +     +    + + L NE   +A   DH  A R
Sbjct: 121 QIRIRLLDLSANEGLEAVLRGEADFGINMMSGQHPDIEFVPLVNEPFVLACRRDHELAER 180

Query: 179 DEVDMLELKGKTVLALG---DGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGA 235
             V   EL    ++ +G       L D AL        +    ++   L T   +V AG 
Sbjct: 181 SSVTWSELSNYRLIGVGRLSGNRMLLDHALS---GLSWRPQWFYEVQHLSTSLGLVEAGL 237

Query: 236 GITLLPELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVI 289
           G++ +P LA+P       +  +  + PI +R L L YR G+ L    E+   ++
Sbjct: 238 GVSAMPSLAMPA-VDHPTLVSVPLIEPIVNRSLGLVYRRGASLSPAAEKFVSIL 290