Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  158 bits (399), Expect = 2e-43
 Identities = 90/297 (30%), Positives = 160/297 (53%), Gaps = 1/297 (0%)

Query: 2   NIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEAG 61
           ++++  YLV L   ++F +AA+ C VSQ TLS  I+ LE+++G  L+ER  +  +FT  G
Sbjct: 6   SLKNLYYLVNLYQEQNFNRAAKLCHVSQSTLSSGIQNLEEQLGHQLIERDHKSFIFTAIG 65

Query: 62  LQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPELE 121
            ++V +++K+L++V    ++   Q   MTG + +G IPT+ P+LL +++   ++ +PEL 
Sbjct: 66  EEVVQRSRKLLTDVDDLVELVKHQGQPMTGDIRLGCIPTIAPFLLSRVVKHCQQEYPELT 125

Query: 122 LYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDEV 181
           L+L E  T +L+  L +G+LD L+LA   +T+ +  +++  +   + +  + +      +
Sbjct: 126 LFLKEDTTERLLDALGKGELDLLLLALPADTSGYHSMKVGIDPFKLVMHKELSSEVHQPI 185

Query: 182 DMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGITLLP 241
           D   L  +++  L   HC+   A+  C  A +     F ATSL TL  MV +  G T LP
Sbjct: 186 DYKALPDESIFLLQSEHCITGHAISACSLADSDKINPFAATSLHTLVQMVNSKLGTTFLP 245

Query: 242 ELALPEDKTKD-GVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVIKHRLQQSE 297
           ++A+      D  +  L      P R + L +R  S     F  L + I+  L+Q+E
Sbjct: 246 QMAIDAGILNDTDLTALTPPGEAPYRDIGLVWRQTSSRIMTFRTLGKAIQSLLEQAE 302