Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., LysR substrate-binding domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score =  218 bits (555), Expect = 1e-61
 Identities = 117/297 (39%), Positives = 178/297 (59%), Gaps = 8/297 (2%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M + + +Y+VA+A  +HF +AAEACFVSQPTLS  I+KLEDE+   + ER +  V  T  
Sbjct: 1   MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELAVQIFERGASEVSVTPV 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120
           G Q+V QA+++L +    +++A Q    + GPL +G I T+GPYLLP ++  + +  P++
Sbjct: 61  GEQIVTQAQRVLEQTMAIREIAKQGMDPLAGPLRLGVIYTIGPYLLPALVKQMIDTVPQM 120

Query: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180
            L L E  T +LV  L++G++DC ++A     A    + LY+E   +AVP  H  A    
Sbjct: 121 PLMLQENFTVRLVELLKQGEIDCAIMAEPFPEAGLMTVPLYDEPFVVAVPRGHELAKASS 180

Query: 181 VDMLELKGKTVLALGDGHCLRDQALGFC-----FAAGAKDDER-FKATSLETLRNMVAAG 234
           VD   LK +T+L LG+GHC RD  LG C     F+  A   ++ F+ +SLET+R+MVA+G
Sbjct: 181 VDPEALKQQTMLLLGNGHCFRDHVLGVCPELSRFSQNADGIQKTFEGSSLETIRHMVASG 240

Query: 235 AGITLLPELALP--EDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVI 289
            GIT+LP  ++P  +    D + Y+    P+P RR+VLA+R         E +A+ +
Sbjct: 241 VGITVLPRTSVPNMQPAANDLLTYVPFQEPVPDRRVVLAWRKSFTRIAAIEAVAKAV 297