Pairwise Alignments

Query, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  218 bits (555), Expect = 1e-61
 Identities = 120/306 (39%), Positives = 182/306 (59%), Gaps = 22/306 (7%)

Query: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60
           M + + +Y+VA+A  +HF +AAEACFVSQPTLS  I+KLEDE+   + ER +  V  T  
Sbjct: 1   MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPI 60

Query: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120
           G Q+V QA+++L +    K++A Q    + GPL +G I T+GPYLLP ++  + +R P++
Sbjct: 61  GEQIVTQAQRVLEQTLAIKEIAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQM 120

Query: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEI-----ELYNEVLSIAVPCDHAW 175
            L L E  T +L+  L++G++D  ++A      PF E       LY+E   +A+P  HAW
Sbjct: 121 PLMLQENYTLKLIELLKQGEIDVAIMA-----LPFPETGLMLRPLYDEPFVVALPSGHAW 175

Query: 176 AARDEVDMLELKGKTVLALGDGHCLRDQALGFC-----FAAGAKDDER-FKATSLETLRN 229
             R ++D  +LK +T+L LG GHC RD  LG C     F+  A   ++ F+ +SLET+R+
Sbjct: 176 ENRPKIDADDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRH 235

Query: 230 MVAAGAGITLLPELALPEDKTKDG------VCYLRAVNPIPSRRLVLAYRPGSPLRQRFE 283
           MVA+G GIT+LP +++ E K   G      + Y+    P+P RR+VLA+R         E
Sbjct: 236 MVASGVGITVLPRMSVHEVKPHAGGIDSGLLSYVAFDEPVPDRRVVLAWRKSFTRMPAIE 295

Query: 284 QLAEVI 289
            + + I
Sbjct: 296 AICDAI 301