Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 738 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  164 bits (414), Expect = 2e-44
 Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 25/345 (7%)

Query: 76  RIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQL 135
           RI +K++++P  L++ +IA ED  +Y H+G  P  I RA +   +SG   QG ST+TQQL
Sbjct: 134 RILIKIDQVPPFLLDTLIAVEDRDFYHHFGVSPKSIARAVWVNTSSGHMRQGGSTLTQQL 193

Query: 136 ARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRS----YGVGAAAQ 191
            +NF+L+NE+ + RK+ E  +A+ +E    KQEILE YLN++++G       +G G A+Q
Sbjct: 194 VKNFYLTNERSLTRKLTEAMMALLLELHYDKQEILEAYLNEVFIGQDGQRAVHGFGLASQ 253

Query: 192 AYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYD 251
            +F + + +L L ++AL+ G+ K PS+ NP  + ERA  RRN+VL  +  +   T  + +
Sbjct: 254 FFFSQPLSELKLHQVALLVGMVKGPSSYNPRRNPERALERRNLVLDLLQQQGVATAEQVE 313

Query: 252 AARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAAN 311
           AA+  P+     G+  + + P   ++ +  + E Y +E     G+ ++T+ D  LQ  A 
Sbjct: 314 AAKKMPLGVTKRGSLADSSFPGFMDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAE 373

Query: 312 QAAINNLLAYDERHGYRGAEKELWQVN------QPAWSSTQLSEYLSN------EPTYGD 359
            +  +       R G    E  +   N      Q    S Q S    N       P    
Sbjct: 374 ASVEDTFKRLGGRKGADEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSL 433

Query: 360 MFPAAVLSVEEKSAQVWVKSY---------GVQTIAWEDMNWARR 395
           + PA  L+  EK +Q  + S+         G     W+  N+ RR
Sbjct: 434 IKPAVYLTALEKPSQYTLTSWLSDETFSVKGADGQVWKPQNYDRR 478



 Score =  120 bits (301), Expect = 3e-31
 Identities = 105/353 (29%), Positives = 152/353 (43%), Gaps = 58/353 (16%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNK--GLTLATL 501
           A V  NPE G V A++G        FNRA  +VR +GS IKP +Y  AL K    TL + 
Sbjct: 395 AMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLIKPAVYLTALEKPSQYTLTSW 454

Query: 502 INDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYL 561
           ++D   +    + G  W+P+N      G   L  GLA S N+   R+  EVG+    + L
Sbjct: 455 LSDETFSV-KGADGQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTARLGLEVGVPNVLKTL 513

Query: 562 TRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFS 621
            R G    +LP   ++ LGAG LTP+++A  +   AN G+      I  V      +   
Sbjct: 514 ARLGVS-RELPAFPSMLLGAGGLTPIEVAAMYQTLANGGFNTPMRGIRSV------LTAD 566

Query: 622 AEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGW 681
            EP          +   F  Q    P +  +I      + RE                  
Sbjct: 567 GEP---------LKRYPFQIQQRFDPASIYLIQSAMQRVMRE------------------ 599

Query: 682 NGTGWRAQALKRR--DIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPN 739
            GTG     +  R   + GKTGT+NDS+D+W+ G++  ++ V W+G DD+    GKT   
Sbjct: 600 -GTGSSVYNVLPRTLTLAGKTGTSNDSRDSWFAGFSQDLLAVVWLGRDDN----GKT--- 651

Query: 740 RNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRDTG 792
                      +G   AL  W  FM  A   +P+     P+NI +  +D  TG
Sbjct: 652 ---------PFTGATGALQVWTSFMRKA-DPLPLDMPQ-PDNIVQAWVDSRTG 693