Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 779 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  580 bits (1495), Expect = e-169
 Identities = 326/788 (41%), Positives = 463/788 (58%), Gaps = 56/788 (7%)

Query: 46  VATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYG 105
           V  LR +QLQ P++V+S D KLIA+FGE RR P++  ++P   I A+++ ED  +  HYG
Sbjct: 1   VEALRSIQLQIPLRVYSSDNKLIAEFGEMRRTPIRFADIPPNFINALLSAEDDNFANHYG 60

Query: 106 FDPIGITRAAFAVLASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLS 165
            DP  + RAA  ++ SG    G STIT Q+A+NFFL++E+   RK  EI +A+ IE+ L+
Sbjct: 61  VDPGSLMRAASQLIKSGHIQSGGSTITMQVAKNFFLTSERSFSRKTTEILLALQIERQLT 120

Query: 166 KQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSV 225
           K EILELY+NKIYLG R+YG+ AAAQ Y+GK ++D++L ++A+IAGLPKAPS  NP+ + 
Sbjct: 121 KDEILELYVNKIYLGNRAYGIEAAAQVYYGKSIRDVSLAQMAMIAGLPKAPSRFNPLANP 180

Query: 226 ERATNRRNVVLQRMLDEKYITKAEYDAARAEPVLPKYHGAEIELNAPYVAEIARAWMVER 285
            R+  RR+ +L RM     I++A+Y AA  EP+   YH    E+NAPY+AE+ARA MV R
Sbjct: 181 ARSKERRDWILGRMYKLGKISEADYTAAINEPLNASYHVPTPEVNAPYIAEMARAEMVGR 240

Query: 286 YGEEAAYTSGMNVYTTVDSKLQRAANQAAINNLLAYDERHGYRGAEKELWQVNQPAWSST 345
           YG + AYT G  V TTV S LQ  AN A    L+ YD+RHGYRG E  L    + AW+  
Sbjct: 241 YGSD-AYTEGFRVTTTVPSNLQEMANTALHEGLMTYDQRHGYRGPESRLPGKTKEAWALE 299

Query: 346 QLSEYLSNEPTYGDMFPAAVLSVEEKSAQVWVKSYGVQT--IAWEDMNWARRFINDDRQG 403
                L+ + T   + PA V SV++   +V  ++ G Q   +AW+ M WAR F+N +  G
Sbjct: 300 -----LTKQRTISSLEPAIVTSVDKDGIKVLTRN-GEQEEHVAWDTMKWARPFLNTNSMG 353

Query: 404 PLPKSANEFLAAGQQIWVRPRTQDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFN 463
             P+  ++    G  I    R Q  A    K +Q+P A  A V+++P++GA+ +LVGGF 
Sbjct: 354 ANPRQPSDVAQVGDLI----RVQRQADNTLKFSQIPAAQGALVSLDPQDGAIRSLVGGFA 409

Query: 464 FVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNS 523
           F  + +NRA Q+ RQ GSS KPF+YSAAL+ G T A+L+NDAPI   DE     WRPKN 
Sbjct: 410 FEQSNYNRALQAKRQPGSSFKPFVYSAALDNGYTAASLVNDAPIVFVDEYLDKVWRPKND 469

Query: 524 PPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGS 583
             T+ GP RLR  L +S+N++++R+L+ +G+D T +Y+++FGF    LPR+ ++ALG  +
Sbjct: 470 TNTFLGPIRLREALYKSRNLVSIRLLQALGVDRTIDYISKFGFNKQDLPRNLSLALGTAT 529

Query: 584 LTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEPKVVCHRECSSE------LD 637
           LTP+++A G+S FAN GY + P+ I ++E+  G   F A P  V   E +S+       +
Sbjct: 530 LTPMEIATGWSTFANGGYKITPYIIDKIESRNGETLFVANPPRVPTGEQASDGLAAPSTE 589

Query: 638 EF--------AEQDAASPYAP----KVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGTG 685
            F        A      P AP    +++  +  ++   ML            D    GTG
Sbjct: 590 TFTVNATPGEATTAPGLPQAPAIAERIVDGRTTYILNSML-----------QDVIKLGTG 638

Query: 686 WRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDD 745
            RA AL R D+ GKTGTTN+SKDAW++GY    V   W GF D   +LG+          
Sbjct: 639 RRALALGRTDLAGKTGTTNESKDAWFSGYNADYVTTVWTGF-DQPESLGR---------- 687

Query: 746 VSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRDTGLLTNKLDSSSMFE 805
               E GG  ALP W+ +M  AL+D P   +  P  I  +R+D  +G         + FE
Sbjct: 688 ---REFGGTVALPIWMSYMGAALKDKPPHTQPEPEGILSLRVDPVSGRAATPGTPGAYFE 744

Query: 806 YFEAGTEP 813
            F++   P
Sbjct: 745 LFKSEDTP 752