Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 813 a.a., peptidase from Pseudomonas fluorescens FW300-N2E3

 Score =  610 bits (1574), Expect = e-179
 Identities = 340/820 (41%), Positives = 479/820 (58%), Gaps = 58/820 (7%)

Query: 16  RLLVF---SLICIILGVTT-IFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQF 71
           RLL F   S++ +  G+   + G + Y+   LP V  LR +QLQ P++V+S DGKLIA+F
Sbjct: 3   RLLKFFGWSIVAVFCGLLLGLSGAFLYLSPGLPSVEALRSIQLQIPLRVYSSDGKLIAEF 62

Query: 72  GEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTI 131
           GE RR P++  ++P   I A+++ ED  +  HYG DP  + RAA  ++ SG    G STI
Sbjct: 63  GEMRRTPIRFADIPPNFINALLSAEDDNFANHYGVDPSSLMRAASQLVKSGHIQSGGSTI 122

Query: 132 TQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQ 191
           T Q+A+NFFL++E+   RK  EI +A+ IE+ L+K EILELY+NKIYLG R+YG+ AAAQ
Sbjct: 123 TMQVAKNFFLTSERSFSRKTTEILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAAAQ 182

Query: 192 AYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYD 251
            Y+GK ++D++L ++A+IAGLPKAPS  NP+ +  R+  RR+ +L RM     I +A Y 
Sbjct: 183 VYYGKSIRDVSLAQMAMIAGLPKAPSRFNPLANPARSKERRDWILGRMYKLGKIDEAAYQ 242

Query: 252 AARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAAN 311
           AA  EP+   YH    E+NAPY+AE+ARA MV RYG + AYT G  V TTV S LQ  AN
Sbjct: 243 AAINEPLNASYHVPTPEVNAPYIAEMARAEMVGRYGSD-AYTEGFRVTTTVPSNLQEMAN 301

Query: 312 QAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEEK 371
            A    L+ YD+RHGYRG E  L      AW++      L+ + T   + PA V  +E+ 
Sbjct: 302 TAVHEGLITYDQRHGYRGPESRLPGKTPAAWATE-----LTKQRTISGLEPAIVTLIEKN 356

Query: 372 SAQVWVKSYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDGAIT 431
             QV  ++ G + ++W+ M WAR F+N +  GP PK  ++    G  I    R Q  A  
Sbjct: 357 GVQVLTRN-GEEHVSWDSMKWARPFLNTNSMGPAPKQPSDVAQVGDLI----RVQRQADN 411

Query: 432 AWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAA 491
           A K +Q+P A +A V+++P+NGA+ ALVGGF F  + +NRA Q+ RQ GSS KPF+YSAA
Sbjct: 412 ALKFSQIPVAQSALVSLDPQNGAIRALVGGFAFEQSNYNRAMQAKRQPGSSFKPFVYSAA 471

Query: 492 LNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLRE 551
           L+ G T ATL+NDAPI   DE     WRPKN   T+ GP R+R  L +S+N++++R+L+ 
Sbjct: 472 LDNGYTPATLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRMREALYKSRNLVSIRLLQA 531

Query: 552 VGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRV 611
           +G+D T +Y+++FGF    LPR+ ++ALG  +LTP+++A G+S FAN GY + P+ I ++
Sbjct: 532 LGVDRTIDYISKFGFNKQDLPRNLSLALGTATLTPMEIATGWSTFANGGYKITPYIIDKI 591

Query: 612 ENPFGNIEFSAEPKVVCHRECSS------------------ELDEFAEQDAASPYAPKVI 653
           E+  G+  F A P  V   + +S                  E         A   A ++I
Sbjct: 592 ESRNGDTLFVANPPSVPKGDIASNGIAAPVSNTFTVNPTPGEAPAAQTTVQAPAVAERII 651

Query: 654 SEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNG 713
             +  F+   ML            D    GTG RA ++ R DI GKTGTTN+SKDAW++G
Sbjct: 652 DGRTTFILNSML-----------EDVIKLGTGRRALSMGRSDIAGKTGTTNESKDAWFSG 700

Query: 714 YAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPV 773
           Y    V   W GF D   +LGK              E GG  ALP W+ +MS AL+  P 
Sbjct: 701 YNADYVTTVWTGF-DQPESLGK-------------REFGGTVALPIWMNYMSAALKGKPP 746

Query: 774 QQKAVPNNIARVRIDRDTGLLTNKLDSSSMFEYFEAGTEP 813
             +A P  I  +R+D  +G         + FE F++   P
Sbjct: 747 HTQAEPEGILSLRVDPVSGRAATPSTPGAYFELFKSEDSP 786