Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 770 a.a., penicillin-binding protein 1B from Pseudomonas stutzeri RCH2

 Score =  169 bits (427), Expect = 7e-46
 Identities = 88/247 (35%), Positives = 145/247 (58%), Gaps = 4/247 (1%)

Query: 76  RIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQL 135
           RI +KL+++P  L+E ++A ED  ++ H+G  P  I RA +  L +G   QG ST+TQQL
Sbjct: 168 RILIKLDQVPPYLVETLVAVEDREFFNHFGVSPKSIARAVWVNLTAGQVRQGGSTLTQQL 227

Query: 136 ARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRS----YGVGAAAQ 191
            +NF+L+NE+ + RKV E  +A+ +E    KQEILE YLN+++LG       +G G A+Q
Sbjct: 228 VKNFYLTNERSLNRKVTEAMMAVLLELHYDKQEILEAYLNEVFLGQDGRRAVHGFGLASQ 287

Query: 192 AYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYD 251
            +FG+ + +L L ++AL+ G+ K P+  NP  + ERA  RRN+VL  + +++ ++  +  
Sbjct: 288 YFFGQPLAELKLPQVALLVGMVKGPTYYNPRRNPERALERRNLVLDLLAEQQVVSADDVA 347

Query: 252 AARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAAN 311
            A+  P+     G+  + + P   ++ +  + E Y +E     G+ V+T+ D  LQ  A 
Sbjct: 348 KAKQAPLGVTQRGSMADSSYPAFLDLVKRQLREDYRDEDLTEEGLRVFTSFDPILQLKAE 407

Query: 312 QAAINNL 318
           QA    L
Sbjct: 408 QAMSETL 414



 Score =  122 bits (306), Expect = 8e-32
 Identities = 107/373 (28%), Positives = 168/373 (45%), Gaps = 56/373 (15%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNK--GLTLATL 501
           A +  NPE G + AL+G        FNRA  + R +GS IKP IY AAL K    TL +L
Sbjct: 427 AMIVTNPETGEIQALLGSRQPGFAGFNRALDASRPIGSLIKPAIYLAALEKPSQYTLTSL 486

Query: 502 INDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYL 561
           + D P +    + G  W+P+N      G   L   LA S N+   R+  ++G+    + L
Sbjct: 487 LEDEPFSV-KGADGQVWKPQNYGRQAYGTVYLYQALANSYNLSTARLGLDLGVPNVLKTL 545

Query: 562 TRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFS 621
            R G    + P   ++ LGAG L P+++A  +   AN G+            P   I   
Sbjct: 546 ERLGAS-PKWPAYPSMLLGAGGLRPIEVADMYQTLANGGF----------NTPLRGIR-- 592

Query: 622 AEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNA-FLTREMLYSNIWGGGEWSSDTG 680
                       S L    E     P+  +   +  A +LT+  +   +      S  TG
Sbjct: 593 ------------SVLTADGEPLKRYPFQIQQRFDPGAIYLTQYAMQRAM------SEGTG 634

Query: 681 WNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNR 740
            +      ++L   ++ GKTGTTNDS+D+W+ G++  ++ V W+G DD+    GKT    
Sbjct: 635 RSAYNRLPRSL---NLAGKTGTTNDSRDSWFAGFSQDLLAVVWLGRDDN----GKT---- 683

Query: 741 NIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRDTGLLTNKLDS 800
                   + +G   AL  W +FM  A   +P+Q   VP+N+    +D  +GL T++   
Sbjct: 684 --------SLTGATGALQVWTDFMRRA-DPLPLQM-PVPDNVTYAWVDARSGLGTDERCP 733

Query: 801 SSMFEYFEAGTEP 813
            ++   +  G+EP
Sbjct: 734 DAVQMPYIRGSEP 746