Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 809 a.a., penicillin-binding protein, 1A family from Pseudomonas stutzeri RCH2

 Score =  621 bits (1602), Expect = 0.0
 Identities = 343/819 (41%), Positives = 495/819 (60%), Gaps = 54/819 (6%)

Query: 11  VKFIKRLL--VFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLI 68
           ++F+K LL   F++ C +L   +I G + Y+  +LP V +LR +QLQ P++V+S D KLI
Sbjct: 1   MRFLKFLLWSCFAVFCALL--LSISGAFLYLSPNLPSVDSLRSIQLQIPLRVYSADDKLI 58

Query: 69  AQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGA 128
           A+FGE RR P++ E++P+E I+A++A ED  +  HYG D  G+ RAA  +L SG    G 
Sbjct: 59  AEFGEMRRSPIRFEDIPQEFIQALLAAEDDNFANHYGVDITGLMRAATQLLKSGQIQTGG 118

Query: 129 STITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGA 188
           STIT Q+A+N+FL++E+   RK+ EI +A+ IE+ LSK EILELY+NKIYLG R+YG+ A
Sbjct: 119 STITMQVAKNYFLTSERSFSRKINEILLALQIERELSKNEILELYVNKIYLGNRAYGIEA 178

Query: 189 AAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKA 248
           A+Q Y+GK + +L++ ++A+IAGLPKAPS  NP+ +  R+  RR+ +L RM     + ++
Sbjct: 179 ASQVYYGKSISELSVAQLAMIAGLPKAPSAFNPVVNPARSKERRDWILGRMFRLGSLDES 238

Query: 249 EYDAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQR 308
            Y  A AEP   +YHGA  EL+A Y+AE+ARA MV R+G  AAYT G  V TTV S+ Q 
Sbjct: 239 SYRQALAEPETARYHGAAPELDASYIAEMARAEMVGRFG-SAAYTDGFRVQTTVSSERQV 297

Query: 309 AANQAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSV 368
           AAN A  + L+ YD+RHGYRG E  L  V +  W+  +L++Y         + PA V  V
Sbjct: 298 AANNALNSGLIEYDQRHGYRGPEARLADVPRENWAQ-ELAKYRG----LSGLQPAVVTQV 352

Query: 369 EEKSAQVWVKSYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDG 428
           +        +    QT++W+ M WAR  +  +  GP P+   + +  G  I  R R QD 
Sbjct: 353 DTAGILALTRDGKEQTVSWDSMKWARPHLGINSMGPRPQRPADVVKVGDVI--RIRWQDE 410

Query: 429 AITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIY 488
           A      +QVP A  A V+++P++G++ AL GGF+F  + +NRA Q+ RQ GSS KPFIY
Sbjct: 411 AAL---FSQVPQAQAALVSLDPQDGSIEALAGGFSFGQSNYNRAIQAKRQPGSSFKPFIY 467

Query: 489 SAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRV 548
           SAAL+ G T A+L+ND+PI   ++     WRPKN   T+ GP R+R  L +S+N++++R+
Sbjct: 468 SAALDAGYTAASLVNDSPIVFVEQGMDRIWRPKNDNNTFLGPIRMREALYKSRNLVSIRL 527

Query: 549 LREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYI 608
           L+ +G+D T +Y++RFGF L  LPR+ ++ALG  +LTP+++A G++ FAN GY +EP+ I
Sbjct: 528 LQTMGIDHTVDYISRFGFNLQDLPRNLSLALGTATLTPMEIATGWTTFANGGYKIEPYLI 587

Query: 609 SRVENPFGNIEFSAEPKVVCHRE--------------CSSELDEFAEQDAASPYAPKVIS 654
            R+E+  GN+ F A P  V   +               S  LD     DA   YA +V+ 
Sbjct: 588 QRIEDREGNLVFEANPARVPPPDDQPAAAVADTFAAPPSRALDTDESTDAGPRYAEQVLD 647

Query: 655 EQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGY 714
           E+ A++   ML            D    GTG RA A+ R DI GKTGTTNDS D+W++GY
Sbjct: 648 ERTAYIMTSML-----------QDVIKRGTGRRALAMGRNDIAGKTGTTNDSIDSWFSGY 696

Query: 715 APGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQ 774
              IV   W GF D  ++LG+              E GG  ALP W+ FMS  L+D+P  
Sbjct: 697 NADIVTTVWAGF-DQPQSLGRN-------------EYGGTVALPIWMTFMSAVLKDMPEH 742

Query: 775 QKAVPNNIARVRIDRDTGLLTNKLDSSSMFEYFEAGTEP 813
             A PN + ++RID  +G         + FE F++   P
Sbjct: 743 PPAEPNGLLKLRIDPVSGRAATPGTPDAYFEVFKSEDSP 781