Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., carboxypeptidase from Azospirillum brasilense Sp245

 Score =  202 bits (515), Expect = 4e-56
 Identities = 113/272 (41%), Positives = 164/272 (60%), Gaps = 8/272 (2%)

Query: 42  DLPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYY 101
           DLPD++ +   + +  + V + DG   A+FG+     L + ++P  LI AV+A ED R+Y
Sbjct: 102 DLPDISKVAQFERRASVTVLAADGAEFARFGDLHGTTLGVRDLPPHLINAVLAIEDRRFY 161

Query: 102 EHYGFDPIGITRAAFAVLASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIE 161
            H+G DPIG+ RA +    SG ++QG STITQQLA+N FL+ EK + RK++E  +A+ +E
Sbjct: 162 SHFGVDPIGLARALYVNWRSGRSAQGGSTITQQLAKNLFLTPEKSLKRKIQEAMLALWLE 221

Query: 162 QLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNP 221
              +K +IL  YLN++YLG  ++GV AAA+ YFGK    L L E A+IAGL KAPS   P
Sbjct: 222 HRFTKDQILTAYLNRVYLGAGTFGVDAAARTYFGKPATQLDLRESAIIAGLLKAPSRYAP 281

Query: 222 IYSVERATNRRNVVLQRMLDEKYITKAEYDAAR-AEPVLPKYHGAEIELNAPYVAEIARA 280
             + + A  R  VV+  M+D  +IT  E +AAR A P   +  G +    A +V E+  A
Sbjct: 282 SSNPDEAAERSRVVMGAMVDAGFITAQELEAARNAPPSAKRKPGGDGRYFADWVTELVSA 341

Query: 281 WMVERYGEEAAYTSGMNVYTTVDSKLQRAANQ 312
           ++   +G+       + V TT+D KLQRAA Q
Sbjct: 342 FVGSGHGD-------VVVRTTLDLKLQRAAEQ 366



 Score =  119 bits (298), Expect = 6e-31
 Identities = 93/328 (28%), Positives = 147/328 (44%), Gaps = 53/328 (16%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLIN 503
           A VAM  + GAV ALVGG ++ +++FNRATQ++RQ GS+ KPF+Y AAL  G +  + + 
Sbjct: 385 ALVAMTTD-GAVRALVGGRDYDNSEFNRATQAMRQPGSAFKPFVYLAALEAGWSPDSPVE 443

Query: 504 DAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTR 563
           DAP+      +   W P N    + G   +   LA S N   VR++  +G++  R     
Sbjct: 444 DAPV------RIGGWSPGNYDGKFRGTITMANALAHSSNTATVRIIDRIGVERVRRVAAG 497

Query: 564 FGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAE 623
            G     L +  ++ALG   +  +++ +G++  AN G  V P+ I+ + +  GN+ +  +
Sbjct: 498 LGIN-SPLGKDLSLALGTSEVNLLELTRGYAGIANRGAPVWPYAITEIRDRDGNVLYRRQ 556

Query: 624 PKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNG 683
                                A    P V       LTR M              TG   
Sbjct: 557 ---------------------AGGSVPVVDPAHAVQLTRMM--------------TGVIE 581

Query: 684 TGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHS---RNLGKTAPNR 740
            G    A   R    K+GTT D +DAW+ G+   +V   W+G D+++   R  G + P +
Sbjct: 582 YGTGKSAKLDRPAAAKSGTTQDYRDAWFVGFTADLVAGVWLGNDNNAEMKRVTGGSLPAK 641

Query: 741 NIEDDVSGAESG-------GKTALPAWV 761
             +  +  A +G       G    PA+V
Sbjct: 642 LWQGFMLDAHAGRPPRPLPGMEGAPAYV 669