Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 740 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  150 bits (380), Expect = 2e-40
 Identities = 93/273 (34%), Positives = 145/273 (53%), Gaps = 8/273 (2%)

Query: 54  LQTPMQVFSQDGKLIAQFGEKRRIPLK-LEEMPKELIEAVIATEDSRYYEHYGFDPIGIT 112
           +Q P+  ++ DG+ +        + L  L +    L +A++A+EDSR+Y H G DP G  
Sbjct: 182 VQGPIAAYAADGEPLQTLRSSSHVELPALSDFSPVLPKALLASEDSRFYWHLGIDPYGTA 241

Query: 113 RAAFAVLASGSASQGASTITQQLARNFF---LSNEKKVMRKVKEIFIAIHIEQLLSKQEI 169
           RA      SG   +GAST+TQQ+AR+ F   +  E  + RKV+E  +A+ +E   SK E+
Sbjct: 242 RAILTNFRSGEVREGASTLTQQIARSLFSDYVGREDSIGRKVREAILALKLEFFYSKDEL 301

Query: 170 LELYLNKIYLGYRSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERAT 229
           L  YLN++YLG   YG   AAQ YFGK  +DL+  E AL+ GL  +P+  +P  ++  A 
Sbjct: 302 LRTYLNRVYLGV-GYGFEDAAQIYFGKSARDLSTSEAALLVGLLPSPNGFSPCTNLAAAQ 360

Query: 230 NRRNVVLQRMLDEKYITKAEYDAARAEPVLPKYHGAEI--ELNAPYVAEIARAWMVERYG 287
            ++N V++RM     I++ E   AR  PV  K    +    + APY        + +  G
Sbjct: 361 RQKNGVIERMQSLGLISEEEARTARRSPVTIKPEACQTSSRVTAPYYYGAVVEELAQLVG 420

Query: 288 EEAAYTSGMNVYTTVDSKLQRAANQAAINNLLA 320
           +         V T+++  +Q AA Q ++ +LLA
Sbjct: 421 DTVVEEGNFAVETSLNPAMQTAAEQ-SLQSLLA 452



 Score =  117 bits (294), Expect = 2e-30
 Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 33/288 (11%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLIN 503
           A V ++  NG + ALVGG ++  ++F+RATQ+ RQ GS+ K F Y+AAL +G++     +
Sbjct: 461 AIVTIDSRNGEIRALVGGVDYQASQFDRATQAYRQPGSTFKVFAYAAALEQGISAGRPYD 520

Query: 504 DAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTR 563
            +P+  W   QG  +R        +G   L   LAQS+N +A+RV REVGLD   +   +
Sbjct: 521 CSPL-VW---QGQQFR---GCERSSGSIDLARALAQSENAVALRVAREVGLDAVVQMARK 573

Query: 564 FGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAE 623
           FG K D  P    + LG   +T ++M   F+  AN G +  P  I R+ +   +   +AE
Sbjct: 574 FGIKADLQP-VPGLVLGQSEVTLLEMTSAFAAIANEGRWNPPHAIRRIYD--SSRCTTAE 630

Query: 624 PKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNG 683
            +  C    + ++ +   +D        VIS   A     ML   +  G   ++  G+  
Sbjct: 631 QRRSC--TLTFDVQQQPRRDRV------VISAATAATLTAMLQQAVSSGTGGAAAIGYGA 682

Query: 684 TGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPG--IVGVAWVGFDDH 729
                         GKTGTTND  D W+ G+ P   +V   W+G DD+
Sbjct: 683 -------------AGKTGTTNDGVDLWFVGFVPSRHLVTGVWLGNDDN 717