Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  196 bits (498), Expect = 4e-54
 Identities = 115/280 (41%), Positives = 164/280 (58%), Gaps = 17/280 (6%)

Query: 60  VFSQDGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVL 119
           + S D  ++ + G   R  +  +++P  L +A +A ED R+YEH G D  GI RA+   L
Sbjct: 32  ILSADNTVLQKIGPATRDKVPFKQIPLRLRQAFLAAEDRRFYEHSGIDLFGIARASVTNL 91

Query: 120 ASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYL 179
            SG   +GASTITQQLAR  FLS E+ + RK+ E  +A  +EQ L+K +ILE YLN +YL
Sbjct: 92  LSGQVQEGASTITQQLARIVFLSQERSLQRKLNEALMAQKLEQELTKDQILEQYLNLVYL 151

Query: 180 GYRSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRM 239
           G  +YGV  AA  YF K V+DL+LGE+A +AGLP AP+  +P+ S+E A  RRN VL RM
Sbjct: 152 GAGAYGVADAAWTYFSKPVQDLSLGEMATLAGLPPAPTAYSPLVSLEVAQERRNSVLSRM 211

Query: 240 LDEKYITKAEYDAARAEPV-----LPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTS 294
            +  +IT +E +AAR EP+      PKY     +  APY  +  R  +      +     
Sbjct: 212 QEVGFITPSEAEAARREPLALKPAAPKY----AQSLAPYFTDYVRQELPRFVAPDVLEYG 267

Query: 295 GMNVYTTVDSKLQRAANQAAINN--------LLAYDERHG 326
           G+ + TT++ + Q+AA+QA  N+        L++ D R G
Sbjct: 268 GLTLKTTLNYRWQQAADQAIQNSTYGSLQGALVSIDPRDG 307



 Score =  143 bits (361), Expect = 3e-38
 Identities = 100/352 (28%), Positives = 169/352 (48%), Gaps = 58/352 (16%)

Query: 424 RTQDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSI 483
           R Q  A  A + +   +   A V+++P +GA+ A+VGG +F  ++FNRATQ+ RQ GS+ 
Sbjct: 278 RWQQAADQAIQNSTYGSLQGALVSIDPRDGAIRAMVGGVDFNRSQFNRATQAYRQPGSTF 337

Query: 484 KPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNV 543
           K F+Y+AA+  G++ + +  DA IN         ++P+N   +++G   L   L  S N+
Sbjct: 338 KMFVYAAAIASGMSPSQVYLDAAINL------GGYKPQNFSRSFSGSISLTQALTNSVNI 391

Query: 544 MAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFV 603
           +A++VLR+VG+D       + G + D L R   +ALGA  +T +++   +   AN G ++
Sbjct: 392 VAIKVLRDVGIDNVIRVARQMGIRAD-LARYYPLALGASDVTLLEITSAYGTLANQGKYL 450

Query: 604 EPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTRE 663
            P  I+ + +  G + +  +              +     A  P +  +++   + L R 
Sbjct: 451 TPHPIAEIIDHRGRVLYQDK--------------QIKPVQALDPGSAAIVT---SMLERV 493

Query: 664 MLYSNIWGGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAW 723
           +                 +GTG  A  L  R + GKTGTT  ++D W+ GY P +V   W
Sbjct: 494 VT----------------SGTG-AAAYLPDRAVAGKTGTTEQARDLWFIGYIPQLVTGVW 536

Query: 724 VGFDDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQ 775
           +G+D    N   T              SG   A  AW  FM  A++D+P ++
Sbjct: 537 LGYD----NFAPTG-------------SGSSAAAVAWYRFMVEAIKDLPPEK 571