Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  183 bits (464), Expect = 4e-50
 Identities = 108/308 (35%), Positives = 172/308 (55%), Gaps = 11/308 (3%)

Query: 14  IKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGE 73
           ++RL  + ++  I G   + G   Y  + +P   +    +    +++ + +G +IA  G 
Sbjct: 90  VRRLAYWCVVLGIWGAIGVGGLVLYYGARMPSATSWSIPERPPNVKILAANGDIIANRGA 149

Query: 74  KRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQ 133
                + LE+M   + +AVIA ED R+Y H+G DP+G+ RA    + SG   QG ST+TQ
Sbjct: 150 TGGEAVALEDMSPYIPQAVIAIEDRRFYSHFGVDPLGLARAMLTNVMSGRMVQGGSTLTQ 209

Query: 134 QLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAY 193
           QLA+N FLS E+ + RKV+E+ +A  +EQ  +K +IL +YLN+++ G  +YGV AA++ Y
Sbjct: 210 QLAKNLFLSPERTLERKVQEVLLAFWLEQKYTKDQILAMYLNRVFFGSNAYGVEAASRRY 269

Query: 194 FGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAA 253
           F K  +D+ LGE AL+AGL KAPS ++P    E A  R  +VL  M +E +I+ +E   A
Sbjct: 270 FNKSARDVNLGEAALLAGLLKAPSRLSPARDPEAAEERAQLVLGAMREEGFISDSEIKTA 329

Query: 254 RAE-PVLPK--YHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAA 310
            ++ P   K  + GAE      YVA++    +    GE    T  + + TT+D  L++ A
Sbjct: 330 MSQAPTRAKSFWSGAE-----HYVADMVMDQVPGMIGE---VTQDLVIDTTIDLTLEKKA 381

Query: 311 NQAAINNL 318
            +     L
Sbjct: 382 EEVLAERL 389



 Score =  124 bits (310), Expect = 3e-32
 Identities = 96/326 (29%), Positives = 142/326 (43%), Gaps = 60/326 (18%)

Query: 405 LPKSANEFLAAGQQIWVRPRTQDGAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNF 464
           L K A E LA       R  T+ G +         NA+ A +      GA+ ALVGG ++
Sbjct: 377 LEKKAEEVLAE------RLETEGGKL---------NASQAALVSIDGTGAIRALVGGRDY 421

Query: 465 VHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSP 524
             ++F+RA+++ RQ GS+ KPF+Y+AAL  G T  ++ NDAP+   +      W P+N  
Sbjct: 422 AESQFDRASKAKRQPGSAFKPFVYAAALEIGRTPMSVRNDAPVRIGN------WTPENYD 475

Query: 525 PTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSL 584
             Y G   L   LA S N +A +++ EVG     +   R G   D +  + +IALG   +
Sbjct: 476 QKYRGEVTLADALANSLNTIAAQLVMEVGPQNVVKLAHRLGIDSD-MQANASIALGTSEV 534

Query: 585 TPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDA 644
           T V++   ++ F N G+   P  I R+    G +                 L E    + 
Sbjct: 535 TLVELTSSYAPFMNGGFKATPHVIRRISTADGTV-----------------LYENTYDNP 577

Query: 645 ASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNG--TGWRAQALKRRDIGGKTGT 702
                P ++SE N  + R +           +  TG N    GW A         GKTGT
Sbjct: 578 PRVLDPAIVSEMNRMMVRVL-----------TDGTGKNARLPGWEA--------AGKTGT 618

Query: 703 TNDSKDAWYNGYAPGIVGVAWVGFDD 728
           T   +DA + GY   +    W G DD
Sbjct: 619 TQSFRDALFVGYTSNLATGIWFGNDD 644