Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 817 a.a., penicillin-binding 1A transmembrane protein from Sinorhizobium meliloti 1021

 Score =  434 bits (1117), Expect = e-126
 Identities = 273/812 (33%), Positives = 434/812 (53%), Gaps = 60/812 (7%)

Query: 25  IILGVTTIFGFYF-YVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLEE 83
           ++LG       Y   +  DLPD   L +       +  + +G L+A++  +RR+ L ++ 
Sbjct: 15  LLLGTAAAVAIYLGAITKDLPDYEVLANYAPPVTTRFHAGNGALMAEYARERRLYLPIQA 74

Query: 84  MPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVL---ASGSASQGASTITQQLARNFF 140
           +P  +  A I+ ED  +Y+H G D  G+ RA    L    SG    GASTITQQ+A+NF 
Sbjct: 75  IPDRVKAAFISAEDKNFYQHPGIDVTGLARAIAVNLQNFGSGRRPVGASTITQQVAKNFL 134

Query: 141 LSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKD 200
           LS+++ + RK+KE  ++  IEQ  SK  ILELYLN+I+ G  SYG+  AA  YF K V +
Sbjct: 135 LSSDQTLDRKIKEAILSFRIEQAYSKDRILELYLNEIFFGLNSYGIAGAALTYFDKSVTE 194

Query: 201 LTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEP--V 258
           LT+ E A +A LPK P+  +P   VE A  RRN V+ RM++  Y+TKA+ + A+ +P  V
Sbjct: 195 LTIAETAYLAALPKGPANYHPFRKVEAAIERRNWVIDRMVENGYVTKADGEEAKQQPLGV 254

Query: 259 LPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAANQAAINNL 318
            P+  GA +   + + AE  R  ++++YG++A Y  G++V T++D +LQ AA +A  + L
Sbjct: 255 KPRRGGAHL-FASDFFAEEVRRQIIQKYGDKALYEGGLSVRTSLDPRLQIAARKALQDGL 313

Query: 319 LAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEEKSAQVWVK 378
           L+YDER G+ G  K + ++             LS+ P +     A VLSV+ + A++ ++
Sbjct: 314 LSYDERRGFHGPVKTI-EIGGDWGEPLSKIPMLSDVPEWK---LAVVLSVDSEGAEIGIQ 369

Query: 379 -----------SYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQD 427
                            IA ++M WA R     R+    KS  E    G  ++V P  + 
Sbjct: 370 PDKEVSGKIVPERVTGRIAAKNMQWAHRSAGGKRKS--AKSPEEVFGPGDVVYVEPLEEA 427

Query: 428 GAITAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFI 487
           G    ++L Q P      VAM+P  G V A+VGGF++  ++FNRATQ++RQ GS+ KPF+
Sbjct: 428 G---EYRLRQPPKVQGGLVAMDPHTGRVLAMVGGFSYGQSEFNRATQAMRQPGSAFKPFV 484

Query: 488 YSAALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVR 547
           Y+AAL+ G T A++I DAPI     + G  WRP+N      GP+ LR+G+ +S+N+M VR
Sbjct: 485 YAAALDNGYTPASVILDAPIE--IVAGGQVWRPENYGGGSAGPSTLRLGIEKSRNLMTVR 542

Query: 548 VLREVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFY 607
           +  ++G++   EY  RFG   D++     ++LG+G  T +++   ++V AN G  ++P  
Sbjct: 543 LANDLGMNIVAEYAERFGI-YDKMAPLLAMSLGSGETTVLRLVSAYAVIANGGKQIKPSL 601

Query: 608 ISRVENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYS 667
           I R+++ +G   F  E +      C+++  E  E+        +V+    ++    M+  
Sbjct: 602 IDRIQDRYGKTIFRHEDRAC--ENCNADDWEAQEEPVLIDNREQVLDPMTSYQITSMM-- 657

Query: 668 NIWGGGEWSSDTGWNGTGWRAQALK-RRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGF 726
                       G    G  A  +K  R + GKTGTTND KDAW+ GY P +V   ++GF
Sbjct: 658 -----------EGVVARGTAAGKIKLDRPVAGKTGTTNDEKDAWFVGYTPDLVAGLYLGF 706

Query: 727 DDHSRNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVR 786
           DD +  LG+            GA  GG +A P +  FM  A++     +  VP  ++ + 
Sbjct: 707 DDPA-PLGR------------GATGGGLSA-PIFNAFMQKAVEGTRPGKFVVPEGMSLIP 752

Query: 787 IDRDTGLLTNKLDSSSMFEYFEAGTEPTEYVS 818
           ++R TG+   + +  ++ E F+ GT P +  S
Sbjct: 753 VNRKTGMAAVEGEPDTIIEAFKPGTGPADTFS 784