Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 744 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  171 bits (434), Expect = 1e-46
 Identities = 97/247 (39%), Positives = 145/247 (58%), Gaps = 8/247 (3%)

Query: 81  LEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQLARNFF 140
           ++E+P  LI+AV+ATED R+++H+G D +G+ RA      +G   QG ST+TQQLA+N F
Sbjct: 132 IDELPDHLIKAVLATEDRRFFDHWGIDFLGLARAMTENARAGGVVQGGSTLTQQLAKNLF 191

Query: 141 LSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKD 200
           LSNE+ + RK+KE F+A+ +E  LSK+EIL LYL++ Y+G  ++G  AAAQ YFGK + D
Sbjct: 192 LSNERTIERKIKEAFLAVWLESNLSKKEILRLYLDRAYMGGGTFGAAAAAQFYFGKAITD 251

Query: 201 LTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPVLP 260
           + L E A++AGL KAP+   P  ++  A  R N VL  ++    +T+ +  AAR  P   
Sbjct: 252 VNLAESAMLAGLFKAPARYAPHVNLPAARARANEVLSNLVQGGLMTEGQVIAARLTP--- 308

Query: 261 KYHGAEIELNAPYVAEIARAWMVERYGEEAA--YTSGMNVYTTVDSKLQRAANQAAINNL 318
               + ++       +    W  E     AA      + V TT+D  LQ+AA +A  + L
Sbjct: 309 ---ASVVDRAQVKAPDFFLDWAFEEVQRIAAPFAQHSLIVRTTIDMGLQQAAEEAVESGL 365

Query: 319 LAYDERH 325
             Y E +
Sbjct: 366 RQYGESY 372



 Score =  112 bits (280), Expect = 8e-29
 Identities = 97/360 (26%), Positives = 158/360 (43%), Gaps = 57/360 (15%)

Query: 446 VAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLINDA 505
           + M    GAV A+VGG ++  ++FNRAT+++RQ GSS K + Y+AA+ KG+T  T++ DA
Sbjct: 379 LVMVEHGGAVRAMVGGRDYGESQFNRATRALRQPGSSFKVYTYAAAMEKGMTPETVVVDA 438

Query: 506 PINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLRE-VGLDETREYLTRF 564
           PI  W       W P+N    Y G   +   LA+S N + VR+ ++ +G +   E   R 
Sbjct: 439 PIT-W-----RGWSPQNYGRKYAGRVTVMNALARSINTIPVRLAKDKLGTEIIAETAKRM 492

Query: 565 GFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEP 624
           G +   +   +T+ LG   +T +  A  ++VF   G       IS++ N  G+I +    
Sbjct: 493 GIETP-VRTDKTMPLGTSEVTVLDQATAYAVFPAGGLQSRRHGISQILNYDGDILYDFGR 551

Query: 625 KVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGT 684
                R   SE               + +S  N  LT+  +                 GT
Sbjct: 552 DAPPPRRVLSE---------------QAVSSMNRILTQIPVI----------------GT 580

Query: 685 GWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIED 744
             RA        GGKTGTT   +DAW+ G+        W G DD++             D
Sbjct: 581 ARRAALDNGIVTGGKTGTTQAYRDAWFVGFTGDYTTAVWFGNDDYTST-----------D 629

Query: 745 DVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPN-NIARVRIDRDTGLLTNKLDSSSM 803
           +++G       +LPA      +   +  ++ +A+P   IA  +  ++    T K D +++
Sbjct: 630 EMTGG------SLPAMTFKRLMDYAEQGIEHRAIPGIEIAPAKPAKERSAETAKPDENAL 683