Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 781 a.a., MrcB penicillin binding protein B from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 1e-37
 Identities = 100/302 (33%), Positives = 154/302 (50%), Gaps = 12/302 (3%)

Query: 18  LVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRI 77
           L F    +++G   ++        D+P    +R+  L+  + + + DG+ + + G  +  
Sbjct: 157 LTFVTCIVLIGAVMVWAL-----KDVP-WNEIRNGTLKPVVVLETADGEPLVRQGPYQGP 210

Query: 78  PLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQLAR 137
             +  + P  LI+AV++ ED R+ +H+G D  GI RA      +GS  +G STITQQL +
Sbjct: 211 YAQYNQFPPHLIDAVLSIEDRRFMDHFGIDVRGIGRALVRNFEAGSVIEGGSTITQQLIK 270

Query: 138 NFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKE 197
             +L +++ + RK++E  IA+ +E  L K+EIL  YLN  YLG  + G+ AAA+ YF K 
Sbjct: 271 LQYLDSDRTIKRKIQEFVIALWLELKLGKKEILTRYLNSAYLGAGATGMPAAARVYFNKN 330

Query: 198 VKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEP 257
           +  L L E A++AGL +APS  NPI ++E A  R  VVL  M+    IT     A  AE 
Sbjct: 331 IDVLNLPESAMLAGLLRAPSQWNPIDNLEGARQRTAVVLDTMVANGKIT-----APDAER 385

Query: 258 VLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSG-MNVYTTVDSKLQRAANQAAIN 316
           V   +      +  P        W+  R  E A  + G   V TT+   LQ+ A +   N
Sbjct: 386 VKESFATLNPTMPTPRSGSWFADWISPRASEIAGPSPGTTTVRTTLVPHLQQIAERVVRN 445

Query: 317 NL 318
            L
Sbjct: 446 AL 447



 Score =  106 bits (265), Expect = 5e-27
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 58/328 (17%)

Query: 441 ANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLAT 500
           +  A VAM P+ GAV A+VGG ++  ++FNRA  ++RQ GS+ K F+Y AAL  G T   
Sbjct: 457 SQAALVAMTPD-GAVVAMVGGRDYKQSQFNRAVTAMRQPGSTFKLFVYYAALKAGFTPTD 515

Query: 501 LINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREY 560
            + DAPI+         W P+NS   Y G   +    A+S N   V + +EVGLD     
Sbjct: 516 RVLDAPIDV------NGWSPENSSGRYRGWVSIAEAFARSLNAPTVALAQEVGLDNVIAA 569

Query: 561 LTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEF 620
               G     L  + ++ALG   ++ +++    S +A+  +   P        P+G + F
Sbjct: 570 ARELGIDAP-LVSTPSLALGTSEVSLLELT---SAYASVRFGKAPV------EPWGIVHF 619

Query: 621 SAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTG 680
            A                     A  P A +V S     +      S++ G  + + +  
Sbjct: 620 QA---------------------AGQPRAFRVGSHTTPAIDLSAYQSDLVGLLQLAVE-- 656

Query: 681 WNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNR 740
             GTG  A         GKTGT+ +++DAW+ G+   ++   WVG DD +   G T    
Sbjct: 657 -RGTGREADP--GAFAAGKTGTSQNNRDAWFVGFTEPLIAAVWVGNDDDTPMKGVT---- 709

Query: 741 NIEDDVSGAESGGKTALPAWVEFMSLAL 768
                      GG      W +FM  A+
Sbjct: 710 -----------GGDLPAHIWRDFMREAM 726