Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 846 a.a., penicillin-binding protein 1A (RefSeq) from Shewanella amazonensis SB2B

 Score =  922 bits (2383), Expect = 0.0
 Identities = 464/838 (55%), Positives = 607/838 (72%), Gaps = 32/838 (3%)

Query: 11  VKFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQ 70
           +K++KR+L+      +LGV  I   YFYV  DLPDV TL+ VQLQTP++++SQDGKLI+Q
Sbjct: 1   MKWLKRILIALFSLALLGVGAIIAAYFYVLPDLPDVTTLKTVQLQTPLKIYSQDGKLISQ 60

Query: 71  FGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGAST 130
           +GEKRRIP+KLE++PK L++A +ATED+R+YEH G DPIGI RAAF + A+G   QGAST
Sbjct: 61  YGEKRRIPMKLEDVPKPLLQAFLATEDARFYEHQGIDPIGIIRAAFVLAATGEKKQGAST 120

Query: 131 ITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAA 190
           ITQQ+ARNFFL+ +K ++RKVKEIFI+ HIE+LL+K EILELY+N+IYLG R+YGVGAAA
Sbjct: 121 ITQQVARNFFLTRDKTIIRKVKEIFISFHIEELLTKDEILELYVNRIYLGQRAYGVGAAA 180

Query: 191 QAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEY 250
           Q Y+GK++KDL+L E+A+IAGLPKAPST+NPI S ERA +RRN+VL RM +  YI  +EY
Sbjct: 181 QVYYGKDLKDLSLAELAVIAGLPKAPSTLNPITSPERAMSRRNIVLMRMREVGYINDSEY 240

Query: 251 DAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAA 310
             A +EP    YHGAEI+L  PYV+E+AR +M+++YGEE AYT G +VYTTVDS+LQ  A
Sbjct: 241 QLAISEPNTASYHGAEIDLYVPYVSEMARDYMIQKYGEEEAYTGGYSVYTTVDSELQLKA 300

Query: 311 NQAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEE 370
            +A  NN+ AYDERHGYRGA + LW+   PA  +  +   L    +  ++ PAAV++V+E
Sbjct: 301 QKALRNNIYAYDERHGYRGAAQVLWKDEAPA--TDTIVSTLKKVASVQELEPAAVINVQE 358

Query: 371 KSAQVWVKSYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDGAI 430
           + A V   +    T+ W+ + WAR+FI+D RQG  PK+A + L AG+++W+R   +D   
Sbjct: 359 QQATVLRNNGETVTLPWQGIQWARKFISDTRQGAAPKTATDVLTAGERVWIRHNGED--- 415

Query: 431 TAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSA 490
             W+L+QVP  ++A V+++P NGA+ ALVGG++F  ++FNR TQ+ RQ+GS+IKPFIY+A
Sbjct: 416 --WQLSQVPEVSSAIVSLDPHNGAIRALVGGYSFSQSQFNRVTQAKRQLGSNIKPFIYAA 473

Query: 491 ALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLR 550
            L KG TLATLIN+APIN+ D SQGTAWRPKNSP TYTGPTRLR+GLAQS NVMAVR LR
Sbjct: 474 TLEKGYTLATLINNAPINKPDLSQGTAWRPKNSPDTYTGPTRLRVGLAQSINVMAVRALR 533

Query: 551 EVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISR 610
             G+D T E LTRFGF  + LPR+E++ALG+ S+TP+Q+ + F+VFAN GY VEPF+I R
Sbjct: 534 YSGIDATVELLTRFGFDPNDLPRNESLALGSPSVTPLQVVRAFTVFANGGYLVEPFFIDR 593

Query: 611 VENPFGNIEFSAEPKVVCHRECSSELDE-FAEQDAASP---------------------- 647
           VE+  GN+    +P + C      E+ E  A  +A++P                      
Sbjct: 594 VESATGNLVEKTQPALACEAPIPEEVSEDMATTEASAPPAMLNAATPADPSSQCGDPAAR 653

Query: 648 YAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWNGTGWR-AQALKRRDIGGKTGTTNDS 706
           YA +VISEQNAFL  E L S IWGGG++S  TGWNGT WR A+ LKR DI GKTGTTN+S
Sbjct: 654 YANRVISEQNAFLITEALKSVIWGGGDFSKGTGWNGTAWRAARLLKRHDIAGKTGTTNES 713

Query: 707 KDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRN-IEDDVSGAESGGKTALPAWVEFMS 765
           +D W++G+ P +V   WVGFDDH R LG+TA N N  +D +SGAE+G KTA PAW EFM 
Sbjct: 714 RDTWFSGFNPDLVTTVWVGFDDHGRELGRTAWNANGAKDQISGAEAGAKTAGPAWNEFMF 773

Query: 766 LALQDVPVQQKAVPNNIARVRIDRDTGLLTNKLDSSSMFEYFEAGTEPTEYVSEHVNE 823
           +AL D P +   VP  I   RID  +G L+ + D +S FEYF AGT PT+Y +  + E
Sbjct: 774 MALADTPEKPMPVPAGIVSARIDYSSGKLSRRTDYTSGFEYFAAGTVPTDYANSAIAE 831