Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 779 a.a., peptidoglycan glycosyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  170 bits (430), Expect = 3e-46
 Identities = 95/252 (37%), Positives = 148/252 (58%), Gaps = 5/252 (1%)

Query: 66  KLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSAS 125
           +LIA  GE R   +   E+P  ++EA++  ED  +YEH+G +P  I RAAF  +++G   
Sbjct: 176 RLIADDGEDRLF-VPRREVPDTMVEALLLVEDRSFYEHHGVNPFAILRAAFVNISAGRTV 234

Query: 126 QGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRS-- 183
           QG ST+TQQLA+NFFLS+E+ ++RKV+E  +AI I+   SK EILE YLN++Y+G     
Sbjct: 235 QGGSTLTQQLAKNFFLSSERSLIRKVREALMAIIIDFRYSKDEILEAYLNEVYMGQDKSR 294

Query: 184 --YGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLD 241
             +G+G A+Q YFG+ + +LT  + A +  + K PS  NP     RA  RR++VL+ +++
Sbjct: 295 GVHGMGLASQFYFGRPLTELTTAQQAFLIAVIKGPSYYNPWRYPARAQERRDLVLRLLME 354

Query: 242 EKYITKAEYDAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTT 301
              I+  ++  A   P+  +  G  +    P      +  +  R+G+     SG+ VYTT
Sbjct: 355 SGKISVNDFQIAAESPLGLRPEGRPVHQRMPAFYTQVKKELALRWGDSLLNESGIKVYTT 414

Query: 302 VDSKLQRAANQA 313
           +D   Q AA +A
Sbjct: 415 LDPIAQEAAEKA 426



 Score =  100 bits (248), Expect = 4e-25
 Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 37/290 (12%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAAL-NKGLTLATLI 502
           A V  +   G + A+VG  N     +NR ++  R +GS +KPF+Y  AL +    L T +
Sbjct: 444 AMVVTDKFGGGIAAMVGDRNPSFEGYNRVSEMRRPIGSLVKPFVYMTALEDSNYNLMTSL 503

Query: 503 NDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLT 562
            D P+   ++  G +W P N   T++G   L   + +S NV  V +   VG+D     L 
Sbjct: 504 KDEPLTVTNK-HGQSWSPMNYDKTFSGQVPLMRAMYKSLNVPTVNLGLAVGVDAVINTLD 562

Query: 563 RFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSA 622
             G++ + +    ++ LGA   +P+ +AQ +   A+NG + +   ++ V      ++ + 
Sbjct: 563 DAGWRGEAINPYPSMLLGAVDGSPLMVAQIYQTLADNGRYRQLSTVTDV------LDMNN 616

Query: 623 EPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGWN 682
           E  ++  R  S +  E A    +     +V+SE                           
Sbjct: 617 E-AILASRLPSEQSLEPAAAYLSQYIMTRVVSE--------------------------- 648

Query: 683 GTGWR-AQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSR 731
           GTG R  +A     + GKTGT+NDS+D+W+ G+    V   WVG DD+ +
Sbjct: 649 GTGARLGRAFPNVTLAGKTGTSNDSRDSWFAGFDERNVAAVWVGRDDNGK 698