Pairwise Alignments

Query, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

Subject, 739 a.a., transglycosylase domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  199 bits (505), Expect = 6e-55
 Identities = 117/308 (37%), Positives = 178/308 (57%), Gaps = 7/308 (2%)

Query: 14  IKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGE 73
           + R++ +S +  I  V  + G   +V + LP + +L   +    + + + DG  +A  GE
Sbjct: 70  VGRVVYWSAVAGIWAVLAVVGVMVWVGAHLPPIQSLEIPKRPPTITIVADDGSTMAVRGE 129

Query: 74  KRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQ 133
           +    + L+E+P  L +A IA ED R+Y+H+G DP+GI RAA A +     SQG ST+TQ
Sbjct: 130 QAGTNVALKELPPYLPKAFIAIEDRRFYQHFGVDPLGIARAAVANVLHRGVSQGGSTLTQ 189

Query: 134 QLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAY 193
           QLA+N FL+ ++ + RK++E+ +A+ +E+  SK EILELYLN++Y G  +YG+ AAAQ Y
Sbjct: 190 QLAKNLFLTQDRTLTRKLQEVELALWLERKHSKAEILELYLNRVYFGSGAYGIEAAAQKY 249

Query: 194 FGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAA 253
           FGK  KD+TL E A++AGL K+PS + P  + E A  R  +VL  M D  ++T  +  AA
Sbjct: 250 FGKSAKDVTLVEAAMLAGLVKSPSRLAPNRNPEGAEKRAQIVLAAMADAGFVTDKQAQAA 309

Query: 254 RAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGE-EAAYTSGMNVYTTVDSKLQRAANQ 312
            A PV          +N  YVA+    W+ E   +        + V T++D +LQ  A  
Sbjct: 310 IANPVYTVKPTGAGTIN--YVAD----WITEVLDDLVGQIDQSIIVETSIDPRLQSVAEA 363

Query: 313 AAINNLLA 320
           A I+ L A
Sbjct: 364 AIIDELAA 371



 Score =  138 bits (347), Expect = 1e-36
 Identities = 105/328 (32%), Positives = 150/328 (45%), Gaps = 60/328 (18%)

Query: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLIN 503
           A VAM P+ G V A++GG N+  ++FNRA  + RQ GS+ KPF+Y  A+  GLT  T+  
Sbjct: 382 ALVAMTPD-GTVRAMIGGRNYADSQFNRAVTAKRQPGSAFKPFVYLTAVEAGLTPDTIRQ 440

Query: 504 DAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTR 563
           DAP++         W+P+N    Y G   L   LA S N +AVR+  EVG         R
Sbjct: 441 DAPLDL------KGWKPENYTHEYFGSVTLTQALAMSLNTVAVRLGLEVGPKNVVRTAHR 494

Query: 564 FGF--KLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFS 621
            G   KLD  P   +IALG   +T  ++   +S FAN G  V P  + R+    GN    
Sbjct: 495 LGIASKLDANP---SIALGTSEVTLTELVGAYSTFANGGLLVSPHVVKRIRTLQGN---- 547

Query: 622 AEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGW 681
              KV+  R         +++ A+    P+ ++  N      M+   +  G    +D   
Sbjct: 548 ---KVLYVR---------SDEPASRVVDPRAVAMMNT-----MMQETLRSGTAHKADL-- 588

Query: 682 NGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRN 741
              GW A         GKTGT+ D +DAW+ GY   +V   W+G DD+S       P + 
Sbjct: 589 --PGWVA--------AGKTGTSQDFRDAWFLGYTSTLVTGVWLGNDDNS-------PTKK 631

Query: 742 IEDDVSGAESGGKTALPAWVEFMSLALQ 769
                    +GG   +  W  FM  AL+
Sbjct: 632 --------ATGGGLPVEVWTRFMREALK 651